RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 MAGEF1Q9HAY2 307 aa16.85■□□□□ 0.29
ERGIC3-217ENST00000488935 FSCN3Q9NQT6 498 aa16.85■□□□□ 0.29
ERGIC3-217ENST00000488935 EHD2Q9NZN4 543 aa16.85■□□□□ 0.29
ERGIC3-217ENST00000488935 HCN2Q9UL51 889 aa16.85■□□□□ 0.29
ERGIC3-217ENST00000488935 SH3BP1Q9Y3L3 701 aa16.85■□□□□ 0.29
ERGIC3-217ENST00000488935 PCDHGA5Q9Y5G8 931 aa16.85■□□□□ 0.29
ERGIC3-217ENST00000488935 PI4KAP42356 2102 aa16.85■□□□□ 0.29
ERGIC3-217ENST00000488935 RTN3O95197 1032 aaPredicted RBP16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 KCNK5O95279 499 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 NR3C1P04150 777 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 SLFN14P0C7P3 912 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 PFKFB1P16118 471 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 PFKLP17858 780 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 KIR2DL1P43626 348 aaPredicted RBP16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 PPP3CCP48454 512 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 LIMK1P53667 647 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 SNRPFP62306 86 aaKnown RBP16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 PMS2CLQ68D20 193 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 PSAPL1Q6NUJ1 521 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 RASSF3Q86WH2 238 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 MIB1Q86YT6 1006 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 PGBD3Q8N328 593 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 PHTF2Q8N3S3 785 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 CEP295NLQ96MC4 621 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 DMAP1Q9NPF5 467 aaPredicted RBP16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 OSER1Q9NX31 292 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 BCCIPQ9P287 314 aaKnown RBP eCLIP16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 MBD1Q9UIS9 605 aaPredicted RBP16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 ATXN2Q99700 1313 aaKnown RBP16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 CEP192Q8TEP8 1941 aa16.84■□□□□ 0.29
ERGIC3-217ENST00000488935 TCRBV21S2A2A0A5A6 115 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 LNP1A1A4G5 178 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 TBC1D3BA6NDS4 549 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 SLC9A3R1O14745 358 aaPredicted RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 TOP3BO95985 862 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 ADH1CP00326 375 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 HLA-DRAP01903 254 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 TRIM49P0CI25 452 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 TRIM49CP0CI26 452 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 PDIA4P13667 645 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 SPINK2P20155 84 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 IRX4P78413 519 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 MRPS21P82921 87 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 ST3GAL2Q16842 350 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 UAP1L1Q3KQV9 507 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 TPGS1Q6ZTW0 290 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 SV2AQ7L0J3 742 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 ASCC3Q8N3C0 2202 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 BHMTQ93088 406 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 SMARCD1Q96GM5 515 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 CNOT6LQ96LI5 555 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 LSM14BQ9BX40 385 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 NACA2Q9H009 215 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 VRTNQ9H8Y1 702 aa16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 APOBEC3GQ9HC16 384 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-217ENST00000488935 ATP8B3O60423 1300 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 E2F8A0AVK6 867 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 CYP26A1O43174 497 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 FOXD2O60548 495 aaPredicted RBP16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 TULP3O75386 442 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 GRIA2P42262 883 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 PIK3CAP42336 1068 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 PTGER3P43115 390 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 ASPAP45381 313 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 GCLMP48507 274 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 CLDN10P78369 228 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 ZACNQ401N2 412 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 CYP2U1Q7Z449 544 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 PDZD8Q8NEN9 1154 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 EEF2KMTQ96G04 330 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 TNIP3Q96KP6 325 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 ACOX2Q99424 681 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 NMUR1Q9HB89 426 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 TMEM74BQ9NUR3 256 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 IL37Q9NZH6 218 aa16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 CGNQ9P2M7 1197 aaKnown RBP16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 KMT2BQ9UMN6 2715 aaPredicted RBP16.82■□□□□ 0.28
ERGIC3-217ENST00000488935 MAP3K13O43283 966 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 TLR5O60602 858 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 KIF20AO95235 890 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 RPN1P04843 607 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 ZDHHC11BP0C7U3 371 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 CD58P19256 250 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 PMLP29590 882 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 NOVA1P51513 510 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 GAD2Q05329 585 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 PPP3CAQ08209 521 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 SGSM1Q2NKQ1 1148 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 C10orf76Q5T2E6 689 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 TOGARAM2Q6ZUX3 1019 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 DDX42Q86XP3 938 aaKnown RBP eCLIP16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 ETFBKMTQ8IXQ9 262 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 OLIG1Q8TAK6 271 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 P2RY11Q96G91 374 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 SLC6A17Q9H1V8 727 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 CD93Q9NPY3 652 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 SPHK2Q9NRA0 654 aa16.81■□□□□ 0.28
ERGIC3-217ENST00000488935 PLK2Q9NYY3 685 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms