RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TBC1D14Q9P2M4 693 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 SCML2Q9UQR0 700 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 SH3BP1Q9Y3L3 701 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 KIF26AQ9ULI4 1882 aaPredicted RBP12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 TRIM49BA6NDI0 452 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 AXIN1O15169 862 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 TLR5O60602 858 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 RPP40O75818 363 aaKnown RBP12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 ADH1CP00326 375 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 ADH5P11766 374 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 FKBP3Q00688 224 aaKnown RBP12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 PUM1Q14671 1186 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 CBWD6Q4V339 395 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 COBLL1Q53SF7 1204 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 CBWD3Q5JTY5 395 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 CBWD5Q5RIA9 395 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 LY6G5CQ5SRR4 150 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 PPP1R26Q5T8A7 1209 aaPredicted RBP12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 DGLUCYQ7Z3D6 616 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 C12orf40Q86WS4 652 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 BBS7Q8IWZ6 715 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 CCDC33Q8N5R6 958 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 CAMKK1Q8N5S9 505 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 USP33Q8TEY7 942 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 TIGD1Q96MW7 591 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 PNKPQ96T60 521 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 DUSP16Q9BY84 665 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 CISHQ9NSE2 258 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 OSER1Q9NX31 292 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 NUDT5Q9UKK9 219 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 GREB1Q4ZG55 1949 aa12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 ZNF638Q14966 1978 aaKnown RBP12.6□□□□□ -0.39
CCHCR1-215ENST00000488920 PTPRDP23468 1912 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 CCDC163A0A0D9SF12 145 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 A0A1W2PQH9 124 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 SLC16A3O15427 465 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 APBB3O95704 486 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 CCDC192P0DO97 292 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 ATP5C1P36542 298 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 KIF11P52732 1056 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 RAD23BP54727 409 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 FOXK2Q01167 660 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 LMNB2Q03252 620 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 EMC10Q5UCC4 262 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 CACNA2D4Q7Z3S7 1137 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 KBTBD6Q86V97 674 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 TMEM25Q86YD3 366 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 ZC3H3Q8IXZ2 948 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 NAT16Q8N8M0 369 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 SLC4A11Q8NBS3 891 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 CCDC26Q8TAB7 109 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 ACDQ96AP0 544 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 KLF16Q9BXK1 252 aaPredicted RBP12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 NMUR1Q9HB89 426 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 DLL3Q9NYJ7 618 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 MAN1B1Q9UKM7 699 aa12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.59□□□□□ -0.39
CCHCR1-215ENST00000488920 ANAPC1Q9H1A4 1944 aa12.58□□□□□ -0.39
CCHCR1-215ENST00000488920 PRR5-ARHGAP8B1AHC4 643 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 DCLK1O15075 740 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 MDM4O15151 490 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 KAT7O95251 611 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 APODP05090 189 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 RARGP13631 454 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 TIE1P35590 1138 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 ARHGAP8P85298 464 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 GAD2Q05329 585 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 LRRC63Q05C16 580 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 KDSRQ06136 332 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 CCDC6Q16204 474 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 ANO4Q32M45 955 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 C10orf120Q5SQS8 335 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 BTBD8Q5XKL5 378 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 SCD5Q86SK9 330 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 TTC39CQ8N584 583 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 OTUB2Q96DC9 234 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 FAXDC2Q96IV6 333 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 PNPLA8Q9NP80 782 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 ARHGEF4Q9NR80 690 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 SPHK2Q9NRA0 654 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 SEMA4GQ9NTN9 838 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 NAGPAQ9UK23 515 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 INVSQ9Y283 1065 aa12.58□□□□□ -0.4
CCHCR1-215ENST00000488920 A0A0A0MRY4 1105 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 PSMA7O14818 248 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 GREM1O60565 184 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 LRP3O75074 770 aa12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 KLF8O95600 359 aaPredicted RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 EIF2DP41214 584 aaKnown RBP12.57□□□□□ -0.4
CCHCR1-215ENST00000488920 GRIA2P42262 883 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms