RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 FBXO44Q9H4M3 255 aa27.51■■□□□ 1.99
RNF220-216ENST00000488865 TRAF3IP3Q9Y228 551 aa27.51■■□□□ 1.99
RNF220-216ENST00000488865 MYOFQ9NZM1 2061 aa27.51■■□□□ 1.99
RNF220-216ENST00000488865 ACACBO00763 2458 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 CCDC130P13994 396 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 SFTPA1Q8IWL2 248 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 ALLCQ8N6M5 410 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 TXNDC5Q8NBS9 432 aaKnown RBP27.5■■□□□ 1.99
RNF220-216ENST00000488865 SPRYD3Q8NCJ5 442 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 MDGA1Q8NFP4 955 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 HMGXB4Q9UGU5 601 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 INVSQ9Y283 1065 aa27.5■■□□□ 1.99
RNF220-216ENST00000488865 CNOT1A5YKK6 2376 aaKnown RBP27.5■■□□□ 1.99
RNF220-216ENST00000488865 HOXC11O43248 304 aaPredicted RBP27.49■■□□□ 1.99
RNF220-216ENST00000488865 BEST1O76090 585 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 TRIM21P19474 475 aaKnown RBP27.49■■□□□ 1.99
RNF220-216ENST00000488865 TIE1P35590 1138 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 PIK3CAP42336 1068 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 KIR2DL1P43626 348 aaPredicted RBP27.49■■□□□ 1.99
RNF220-216ENST00000488865 ASPAP45381 313 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 PREPLQ4J6C6 727 aaPredicted RBP27.49■■□□□ 1.99
RNF220-216ENST00000488865 EOGTQ5NDL2 527 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 C1orf220Q5T0J3 134 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 BTBD8Q5XKL5 378 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 TMEM92Q6UXU6 159 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 CCDC47Q96A33 483 aaKnown RBP27.49■■□□□ 1.99
RNF220-216ENST00000488865 SPATA32Q96LK8 384 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 NACA2Q9H009 215 aa27.49■■□□□ 1.99
RNF220-216ENST00000488865 FAM237AA0A1B0GTK4 181 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 KLF8O95600 359 aaPredicted RBP27.48■■□□□ 1.99
RNF220-216ENST00000488865 HLA-DRAP01903 254 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 VAMP7P51809 220 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 MAP3K7CLP57077 242 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 NFIL3Q16649 462 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 RNF43Q68DV7 783 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 SPOPLQ6IQ16 392 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 BBS7Q8IWZ6 715 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 ETFBKMTQ8IXQ9 262 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 PHTF2Q8N3S3 785 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 OLIG1Q8TAK6 271 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 KCNV2Q8TDN2 545 aa27.48■■□□□ 1.99
RNF220-216ENST00000488865 POLMQ9NP87 494 aaPredicted RBP27.48■■□□□ 1.99
RNF220-216ENST00000488865 TLR8Q9NR97 1041 aaKnown RBP27.48■■□□□ 1.99
RNF220-216ENST00000488865 ABCA7Q8IZY2 2146 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 SGK1O00141 431 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 TLR5O60602 858 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 RHOBTB3O94955 611 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 HNRNPLP14866 589 aaKnown RBP eCLIP27.47■■□□□ 1.99
RNF220-216ENST00000488865 SYKP43405 635 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 KRT85P78386 507 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 KDSRQ06136 332 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 ENPEPQ07075 957 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 INCA1Q0VD86 236 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 ORC1Q13415 861 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 EMC10Q5UCC4 262 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 TCEAL6Q6IPX3 200 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 C12orf29Q8N999 325 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 TCEAL3Q969E4 200 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 LSM14BQ9BX40 385 aaKnown RBP27.47■■□□□ 1.99
RNF220-216ENST00000488865 IMPG2Q9BZV3 1241 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 SPHK2Q9NRA0 654 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 EPG5Q9HCE0 2579 aa27.47■■□□□ 1.99
RNF220-216ENST00000488865 MYH10P35580 1976 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 FAM200BP0CF97 657 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 HTR3DQ70Z44 454 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 INTS8Q75QN2 995 aaKnown RBP27.46■■□□□ 1.99
RNF220-216ENST00000488865 WHAMMQ8TF30 809 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 HNRNPABQ99729 332 aaKnown RBP27.46■■□□□ 1.99
RNF220-216ENST00000488865 EDEM2Q9BV94 578 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 CYP3A43Q9HB55 503 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 FAM49BQ9NUQ9 324 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 DEC1Q9P2X7 70 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 NUP205Q92621 2012 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 THADAQ6YHU6 1953 aa27.46■■□□□ 1.99
RNF220-216ENST00000488865 BCKDHBP21953 392 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 KCNA4P22459 653 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 NR2F2P24468 414 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 PGFP49763 221 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 NDUFA8P51970 172 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 NUDT18Q6ZVK8 323 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 TTC30AQ86WT1 665 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 NAT16Q8N8M0 369 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 WBP2Q969T9 261 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 NT5C1AQ9BXI3 368 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 PNPLA8Q9NP80 782 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 CYLDQ9NQC7 956 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 SCML2Q9UQR0 700 aa27.45■■□□□ 1.98
RNF220-216ENST00000488865 TBC1D3BA6NDS4 549 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 ADAM23O75077 832 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 TULP3O75386 442 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 IRF1P10914 325 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 ADORA2BP29275 332 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 P2RY2P41231 377 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 ANO4Q32M45 955 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 CLEC20AQ6ZU45 233 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 CYP2U1Q7Z449 544 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 TRMT11Q7Z4G4 463 aaKnown RBP27.44■■□□□ 1.98
RNF220-216ENST00000488865 TMEM25Q86YD3 366 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 CYFIP2Q96F07 1278 aa27.44■■□□□ 1.98
RNF220-216ENST00000488865 SPACA7Q96KW9 195 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms