RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ZNF77Q15935 545 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 MEA1Q16626 185 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 FILIP1LQ4L180 1135 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 C10orf120Q5SQS8 335 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 GJB7Q6PEY0 223 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 RALGPS2Q86X27 583 aaPredicted RBP13.56□□□□□ -0.24
PHF1-210ENST00000488767 PJA1Q8NG27 643 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 OSCP1Q8WVF1 389 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 FAM3CQ92520 227 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 LSM14BQ9BX40 385 aaKnown RBP13.56□□□□□ -0.24
PHF1-210ENST00000488767 OSBPL6Q9BZF3 934 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 RNF38Q9H0F5 515 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 IRF2BPLQ9H1B7 796 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 PDCL3Q9H2J4 239 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 CCSER2Q9H7U1 834 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 CFAP97Q9P2B7 532 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 TBC1D14Q9P2M4 693 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 LIMA1Q9UHB6 759 aaKnown RBP13.56□□□□□ -0.24
PHF1-210ENST00000488767 LSM7Q9UK45 103 aaKnown RBP13.56□□□□□ -0.24
PHF1-210ENST00000488767 STRIP2Q9ULQ0 834 aa13.56□□□□□ -0.24
PHF1-210ENST00000488767 A0A1W2PQH9 124 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 FAM170BA6NMN3 283 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 RNF225M0QZC1 329 aaPredicted RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 ARNTLO00327 626 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 SART1O43290 800 aaKnown RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 FBXO21O94952 628 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 RARGP13631 454 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 KRT9P35527 623 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 ACADSBP45954 432 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 COPB1P53618 953 aaKnown RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 VCPP55072 806 aaKnown RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
PHF1-210ENST00000488767 ADIGQ0VDE8 80 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 RUNX3Q13761 415 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 RAB41Q5JT25 222 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 CWF19L1Q69YN2 538 aaKnown RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 KLHDC10Q6PID8 442 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 RNF139Q8WU17 664 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 KCTD13Q8WZ19 329 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 TFAP2BQ92481 460 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 SHC3Q92529 594 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 SECISBP2LQ93073 1101 aaKnown RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 HSFY1Q96LI6 401 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 LRRC3BQ96PB8 259 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 NOX5Q96PH1 765 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 TRIM62Q9BVG3 475 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 EBF3Q9H4W6 596 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 LTB4R2Q9NPC1 389 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 PLCB1Q9NQ66 1216 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 CYLDQ9NQC7 956 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 CNGB3Q9NQW8 809 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 OLA1Q9NTK5 396 aaKnown RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 DNMT3LQ9UJW3 386 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 NDRG2Q9UN36 371 aaKnown RBP13.55□□□□□ -0.24
PHF1-210ENST00000488767 USP3Q9Y6I4 520 aa13.55□□□□□ -0.24
PHF1-210ENST00000488767 E2F8A0AVK6 867 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 LGALS16A8MUM7 142 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 SPECC1L-ADORA2AF8WAN1 911 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 LCP1P13796 627 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 UCHL3P15374 230 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 UBXN1Q04323 297 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 TNK2Q07912 1038 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 LRRC32Q14392 662 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 KLHDC7AQ5VTJ3 777 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 BTBD8Q5XKL5 378 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 TMEM105Q8N8V8 129 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 ZNF606Q8WXB4 792 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 OTUB2Q96DC9 234 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 FAM83CQ9BQN1 747 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 DDX23Q9BUQ8 820 aaKnown RBP13.54□□□□□ -0.24
PHF1-210ENST00000488767 ULBP1Q9BZM6 244 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 FOXQ1Q9C009 403 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 SIX2Q9NPC8 291 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 ST7Q9NRC1 585 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
PHF1-210ENST00000488767 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
PHF1-210ENST00000488767 WNT6Q9Y6F9 365 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 GREB1Q4ZG55 1949 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 MYH10P35580 1976 aa13.54□□□□□ -0.24
PHF1-210ENST00000488767 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 OBSL1O75147 1896 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 GOLGA6L19H0YKK7 550 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 ADH1CP00326 375 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
PHF1-210ENST00000488767 IRF1P10914 325 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 CD72P21854 359 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 CTHP32929 405 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 RGS7P49802 495 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 PTPN5P54829 565 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 COG7P83436 770 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 APBA1Q02410 837 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 GRSF1Q12849 480 aaKnown RBP eCLIP13.53□□□□□ -0.24
PHF1-210ENST00000488767 DRAP1Q14919 205 aaPredicted RBP13.53□□□□□ -0.24
PHF1-210ENST00000488767 PKDCCQ504Y2 493 aa13.53□□□□□ -0.24
PHF1-210ENST00000488767 TRIM68Q6AZZ1 485 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms