RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ASTLQ6HA08 431 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 C1orf228Q6PIY5 440 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 KIAA1958Q8N8K9 716 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 SLC35F5Q8WV83 523 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 ZFYVE19Q96K21 471 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 ZSWIM1Q9BR11 485 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 STK33Q9BYT3 514 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 HSD3B7Q9H2F3 369 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 CCSER2Q9H7U1 834 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 TBC1D17Q9HA65 648 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 DUS2Q9NX74 493 aaKnown RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 CLIC5Q9NZA1 410 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 MRPS17Q9Y2R5 130 aaKnown RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 MYO16Q9Y6X6 1858 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 TULP2O00295 520 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 RARGP13631 454 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 ATP1A3P13637 1013 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 IFNAR2P48551 515 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 GOLGA8FQ08AF8 430 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 GOLGA8DPQ0D2H9 430 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 ADIGQ0VDE8 80 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 USP4Q13107 963 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 IQCB1Q15051 598 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 SYCP1Q15431 976 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 ZNF77Q15935 545 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 ITPRIPL2Q3MIP1 535 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 PM20D1Q6GTS8 502 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 DPY19L2P1Q6NXN4 242 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 ZNF852Q6ZMS4 543 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 TPRG1Q6ZUI0 275 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 FAM71AQ8IYT1 594 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 ZNF276Q8N554 614 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 NEK11Q8NG66 645 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 MSANTD3Q96H12 275 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 HSFY1Q96LI6 401 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 NELL2Q99435 816 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 FAM83CQ9BQN1 747 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 ULBP1Q9BZM6 244 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 C8orf33Q9H7E9 229 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-207ENST00000488591 NMUR1Q9HB89 426 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 CYLDQ9NQC7 956 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 CNGB3Q9NQW8 809 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 FAM207AQ9NSI2 230 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-207ENST00000488591 SMPD4Q9NXE4 827 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 AJAP1Q9UKB5 411 aaPredicted RBP15.83■□□□□ 0.12
CXCL12-207ENST00000488591 PIAS3Q9Y6X2 628 aa15.83■□□□□ 0.12
CXCL12-207ENST00000488591 KANSL1LA0AUZ9 987 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 GOLGA6L19H0YKK7 550 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 ARNTLO00327 626 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 SLC9A3R1O14745 358 aaPredicted RBP15.82■□□□□ 0.12
CXCL12-207ENST00000488591 LCP1P13796 627 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 AOC1P19801 751 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 KRT9P35527 623 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 GPD2P43304 727 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 PGFP49763 221 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 RGS7P49802 495 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 YWHAGP61981 247 aaKnown RBP eCLIP15.82■□□□□ 0.12
CXCL12-207ENST00000488591 AMPD2Q01433 879 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 NFKBIBQ15653 356 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 C10orf120Q5SQS8 335 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 PMF1Q6P1K2 205 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 KLHDC10Q6PID8 442 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 RSRC2Q7L4I2 434 aaKnown RBP15.82■□□□□ 0.12
CXCL12-207ENST00000488591 SCD5Q86SK9 330 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 SCML4Q8N228 414 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 STK32AQ8WU08 396 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 OSCP1Q8WVF1 389 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 GOLGA1Q92805 767 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 ATP2A3Q93084 1043 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 NAA15Q9BXJ9 866 aaKnown RBP15.82■□□□□ 0.12
CXCL12-207ENST00000488591 CBX8Q9HC52 389 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 ACP6Q9NPH0 428 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 ST7Q9NRC1 585 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.82■□□□□ 0.12
CXCL12-207ENST00000488591 GTSE1Q9NYZ3 720 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 CFAP97Q9P2B7 532 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 DNMT3LQ9UJW3 386 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 SH3BP1Q9Y3L3 701 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 SIT1Q9Y3P8 196 aa15.82■□□□□ 0.12
CXCL12-207ENST00000488591 HELZP42694 1942 aaKnown RBP15.82■□□□□ 0.12
CXCL12-207ENST00000488591 E2F8A0AVK6 867 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 NCAM2O15394 837 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 FBXO21O94952 628 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 SERPINC1P01008 464 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 AVPR2P30518 371 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 CLCN1P35523 988 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 ACADSBP45954 432 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 POLR2FP61218 127 aaKnown RBP15.81■□□□□ 0.12
CXCL12-207ENST00000488591 NR1H3Q13133 447 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 RUNX3Q13761 415 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 UBXN2BQ14CS0 331 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 IER5LQ5T953 404 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 BTBD8Q5XKL5 378 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 DENND1BQ6P3S1 775 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 APTXQ7Z2E3 356 aaKnown RBP15.81■□□□□ 0.12
CXCL12-207ENST00000488591 TICRRQ7Z2Z1 1910 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 RALGPS2Q86X27 583 aaPredicted RBP15.81■□□□□ 0.12
CXCL12-207ENST00000488591 CPA6Q8N4T0 437 aa15.81■□□□□ 0.12
CXCL12-207ENST00000488591 TTC8Q8TAM2 541 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms