RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 SCN5AQ14524 2016 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 PODXLO00592 558 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 CXCL10P02778 98 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 TMEM253P0C7T8 217 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 CHRNA3P32297 505 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 SSTR3P32745 418 aaPredicted RBP14.34□□□□□ -0.11
COPS7B-221ENST00000488111 CLCNKBP51801 687 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 KLC1Q07866 573 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 CLLU1OSQ5K130 101 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 ADAT2Q7Z6V5 191 aaKnown RBP14.34□□□□□ -0.11
COPS7B-221ENST00000488111 SLC30A5Q8TAD4 765 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 LNX1Q8TBB1 728 aaPredicted RBP14.34□□□□□ -0.11
COPS7B-221ENST00000488111 ARHGEF2Q92974 986 aaKnown RBP14.34□□□□□ -0.11
COPS7B-221ENST00000488111 VWCEQ96DN2 955 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 TMEM237Q96Q45 408 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 PIDD1Q9HB75 910 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 PCYOX1Q9UHG3 505 aa14.34□□□□□ -0.11
COPS7B-221ENST00000488111 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.33□□□□□ -0.11
COPS7B-221ENST00000488111 EOMESO95936 686 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 CSF2RAP15509 400 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 CYP11B1P15538 503 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 RAG1P15918 1043 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 CYP3A5P20815 502 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 SP100P23497 879 aaPredicted RBP14.33□□□□□ -0.11
COPS7B-221ENST00000488111 GATMP50440 423 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 PPP1R15BQ5SWA1 713 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 PALB2Q86YC2 1186 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 RBBP8NLQ8NC74 664 aaPredicted RBP14.33□□□□□ -0.11
COPS7B-221ENST00000488111 SLC35G2Q8TBE7 412 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 EPS8L1Q8TE68 723 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 GRAMD1AQ96CP6 724 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 IFT43Q96FT9 208 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 SERPINB12Q96P63 405 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 VRTNQ9H8Y1 702 aa14.33□□□□□ -0.11
COPS7B-221ENST00000488111 CREB1P16220 341 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 GM2AP17900 193 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 TNFAIP3P21580 790 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 GLB1LQ6UWU2 654 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
COPS7B-221ENST00000488111 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.12
COPS7B-221ENST00000488111 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 UBR7Q8N806 425 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 APBB2Q92870 758 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 ART4Q93070 314 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 C18orf8Q96DM3 657 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 TSPAN18Q96SJ8 248 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 AGPAT1Q99943 283 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 BCO2Q9BYV7 579 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 UBN1Q9NPG3 1134 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 SLC38A7Q9NVC3 462 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 PCDHB7Q9Y5E2 793 aa14.33□□□□□ -0.12
COPS7B-221ENST00000488111 TIMP1P01033 207 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 PDHA1P08559 390 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 CTNNA2P26232 953 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 ATP5DP30049 168 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 ZNF211Q13398 564 aaPredicted RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 TBC1D25Q3MII6 688 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 PAN2Q504Q3 1202 aaKnown RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 WASHC2DQ5SRD0 308 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 TMEM154Q6P9G4 183 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 TRMT10CQ7L0Y3 403 aaKnown RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 UBE2Q1Q7Z7E8 422 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 PRELID2Q8N945 189 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 FAM13CQ8NE31 585 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 INPP5DQ92835 1189 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 FAM136AQ96C01 138 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 MAGEB18Q96M61 343 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 TGS1Q96RS0 853 aaKnown RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 SYT11Q9BT88 431 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 IRAK4Q9NWZ3 460 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 TMEM161AQ9NX61 479 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 HMGXB4Q9UGU5 601 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 NOCTQ9UK39 431 aaKnown RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 RALGAPA2Q2PPJ7 1873 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 KPNA7A9QM74 516 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 RNF8O76064 485 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 PARNO95453 639 aaKnown RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 ACRP10323 421 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 P4HA1P13674 534 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 CHRNB2P17787 502 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 LRPAP1P30533 357 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 LILRA4P59901 499 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 TSNAXIP1Q2TAA8 658 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 ZNF280BQ86YH2 543 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 C3orf58Q8NDZ4 430 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 CFAP61Q8NHU2 1237 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 ALG3Q92685 438 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 TWNKQ96RR1 684 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 MRPL45Q9BRJ2 306 aaKnown RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 LRFN2Q9ULH4 789 aa14.32□□□□□ -0.12
COPS7B-221ENST00000488111 RPL26L1Q9UNX3 145 aaKnown RBP14.32□□□□□ -0.12
COPS7B-221ENST00000488111 STAU1O95793 577 aaKnown RBP14.31□□□□□ -0.12
COPS7B-221ENST00000488111 CFHP08603 1231 aa14.31□□□□□ -0.12
COPS7B-221ENST00000488111 TAF6P49848 677 aa14.31□□□□□ -0.12
COPS7B-221ENST00000488111 LAMB3Q13751 1172 aa14.31□□□□□ -0.12
COPS7B-221ENST00000488111 MPP2Q14168 576 aa14.31□□□□□ -0.12
COPS7B-221ENST00000488111 LONRF1Q17RB8 773 aa14.31□□□□□ -0.12
COPS7B-221ENST00000488111 OR52E8Q6IFG1 317 aa14.31□□□□□ -0.12
COPS7B-221ENST00000488111 IRGCQ6NXR0 463 aa14.31□□□□□ -0.12
COPS7B-221ENST00000488111 TTC27Q6P3X3 843 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms