RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PDGFRLQ15198 375 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 VWA3BQ502W6 1294 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 PKDCCQ504Y2 493 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 TCP11X2Q5H9J9 407 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 CCDC186Q7Z3E2 898 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 RALGPS2Q86X27 583 aaPredicted RBP17.96■□□□□ 0.47
HMG20B-212ENST00000487894 FAM122AQ96E09 287 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 CHFRQ96EP1 664 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 NELL2Q99435 816 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 SIX2Q9NPC8 291 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 CYLDQ9NQC7 956 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 ANO10Q9NW15 660 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 DUS2Q9NX74 493 aaKnown RBP17.96■□□□□ 0.47
HMG20B-212ENST00000487894 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
HMG20B-212ENST00000487894 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.96■□□□□ 0.47
HMG20B-212ENST00000487894 MYO15AQ9UKN7 3530 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 DMDP11532 3685 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 A0A1W2PQH9 124 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 TLR5O60602 858 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 EEF1GP26641 437 aaKnown RBP17.95■□□□□ 0.46
HMG20B-212ENST00000487894 IFNAR2P48551 515 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 SLC8A3P57103 927 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 EML3Q32P44 896 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 C1orf228Q6PIY5 440 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 LCLAT1Q6UWP7 414 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 ENOSF1Q7L5Y1 443 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 SCD5Q86SK9 330 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 UBA3Q8TBC4 463 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 CLDN23Q96B33 292 aa17.95■□□□□ 0.46
HMG20B-212ENST00000487894 AJAP1Q9UKB5 411 aaPredicted RBP17.95■□□□□ 0.46
HMG20B-212ENST00000487894 VPS13AQ96RL7 3174 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 SETSIPP0DME0 302 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 KRT5P13647 590 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 PLA2G4AP47712 749 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 MFAP3P55082 362 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 NHLH1Q02575 133 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 STILQ15468 1287 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 DDX42Q86XP3 938 aaKnown RBP eCLIP17.94■□□□□ 0.46
HMG20B-212ENST00000487894 KIAA1958Q8N8K9 716 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 ATP2A3Q93084 1043 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 FAM81BQ96LP2 452 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.94■□□□□ 0.462e-7■□□□□ 8.4
HMG20B-212ENST00000487894 CFAP97Q9P2B7 532 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 ATG2BQ96BY7 2078 aa17.94■□□□□ 0.46
HMG20B-212ENST00000487894 BECN2A8MW95 431 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 M0QYV0 167 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 SCAMP3O14828 347 aaKnown RBP17.93■□□□□ 0.46
HMG20B-212ENST00000487894 NCAM2O15394 837 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 TBX18O95935 607 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 RARGP13631 454 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 MAGEA9P43362 315 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 RPS9P46781 194 aaKnown RBP17.93■□□□□ 0.46
HMG20B-212ENST00000487894 PSEN1P49768 467 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 TKTL1P51854 596 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 TYRO3Q06418 890 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 PON2Q15165 354 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 CNGA2Q16280 664 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 ARHGAP44Q17R89 818 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 DPY19L2P1Q6NXN4 242 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 CAVIN1Q6NZI2 390 aaKnown RBP17.93■□□□□ 0.46
HMG20B-212ENST00000487894 BHLHA9Q7RTU4 235 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 CPA6Q8N4T0 437 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 WBP2Q969T9 261 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 ULBP1Q9BZM6 244 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 LINC00597Q9H2U6 94 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 ECT2Q9H8V3 914 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 TAB2Q9NYJ8 693 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 NAGPAQ9UK23 515 aa17.93■□□□□ 0.46
HMG20B-212ENST00000487894 H0Y858 1186 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 CHRNB1P11230 501 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 GJA4P35212 333 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 MYL5Q02045 173 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 ADIGQ0VDE8 80 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 KCNMA1Q12791 1236 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 KRT31Q15323 416 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 ANGPT1Q15389 498 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 PM20D1Q6GTS8 502 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 KCTD13Q8WZ19 329 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 SHC3Q92529 594 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 SECISBP2LQ93073 1101 aaKnown RBP17.92■□□□□ 0.46
HMG20B-212ENST00000487894 NACA2Q9H009 215 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 FANCLQ9NW38 375 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 CLIC5Q9NZA1 410 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 NUDT5Q9UKK9 219 aa17.92■□□□□ 0.46
HMG20B-212ENST00000487894 E2F8A0AVK6 867 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 PES1O00541 588 aaKnown RBP17.91■□□□□ 0.46
HMG20B-212ENST00000487894 MDM4O15151 490 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 GABBR2O75899 941 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 NFATC1O95644 943 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 ZBED1O96006 694 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 IRF1P10914 325 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 ATP5C1P36542 298 aaKnown RBP17.91■□□□□ 0.46
HMG20B-212ENST00000487894 KLHDC10Q6PID8 442 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 ZNF276Q8N554 614 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 SLC35F5Q8WV83 523 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 KLF16Q9BXK1 252 aaPredicted RBP17.91■□□□□ 0.46
HMG20B-212ENST00000487894 CHRDQ9H2X0 955 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 LMAN1LQ9HAT1 526 aa17.91■□□□□ 0.46
HMG20B-212ENST00000487894 LRRC4Q9HBW1 653 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms