RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.88□□□□□ -0.838e-19■□□□□ 8
SF3B1-211ENST00000487698 KIAA0355O15063 1070 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 MDM4O15151 490 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 PRPSAP2O60256 369 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 TJP3O95049 919 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 EFEMP2O95967 443 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 GALTP07902 379 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 CD48P09326 243 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 CAPN2P17655 700 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 BDNFP23560 247 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 ITGB8P26012 769 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 BCAR1P56945 870 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 CCNG2Q16589 344 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 VARS2Q5ST30 1063 aaKnown RBP9.87□□□□□ -0.83
SF3B1-211ENST00000487698 DUPD1Q68J44 220 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 EMBQ6PCB8 327 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 C4orf50Q6ZRC1 276 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 STRADAQ7RTN6 431 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 DEFB106AQ8N104 65 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 FAM71BQ8TC56 605 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.87□□□□□ -0.83
SF3B1-211ENST00000487698 ERP44Q9BS26 406 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 RAB17Q9H0T7 212 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 CALCOCO1Q9P1Z2 691 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 NFU1Q9UMS0 254 aa9.87□□□□□ -0.83
SF3B1-211ENST00000487698 UTP11Q9Y3A2 253 aaKnown RBP9.87□□□□□ -0.83
SF3B1-211ENST00000487698 SF3B1O75533 1304 aaKnown RBP eCLIP9.87□□□□□ -0.834e-7■■■■■ 31
SF3B1-211ENST00000487698 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 TRIM43BA6NCK2 446 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DGKIO75912 1065 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 TIMP1P01033 207 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 ALDH2P05091 517 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FYNP06241 537 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 OR4Q2P0C623 313 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DESP17661 470 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 CTCFP49711 727 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 KCTD19Q17RG1 926 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 SLC25A52Q3SY17 297 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 BOLA3Q53S33 107 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 ZFYVE27Q5T4F4 411 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 PM20D1Q6GTS8 502 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FUT10Q6P4F1 479 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DRICH1Q6PGQ1 229 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 HFE2Q6ZVN8 426 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 BBS12Q6ZW61 710 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 TMEM173Q86WV6 379 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 VSIG1Q86XK7 387 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 BCL7CQ8WUZ0 217 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 CAVIN3Q969G5 261 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FAM149B1Q96BN6 582 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 TRIM43Q96BQ3 446 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 NPY6RQ99463 290 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 RC3H2Q9HBD1 1191 aaKnown RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 POPDC2Q9HBU9 364 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FAM53CQ9NYF3 392 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 RASAL2Q9UJF2 1139 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FAN1Q9Y2M0 1017 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 ABHD14A-ACY1A0A1B0GW23 586 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 YJEFN3A6XGL0 299 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 E7ENQ6 273 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DAPK3O43293 454 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 ZBED1O96006 694 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 NOS2P35228 1153 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 KCNJ1P48048 391 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DRG2P55039 364 aaKnown RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 ELAVL2Q12926 359 aaKnown RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 NNTQ13423 1086 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DPYSL3Q14195 570 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 CASP8Q14790 479 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 SLC39A12Q504Y0 691 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 ODF2Q5BJF6 829 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FAM171A1Q5VUB5 890 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 KAZNQ674X7 775 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 HDXQ7Z353 690 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 NECAB2Q7Z6G3 386 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DDX42Q86XP3 938 aaKnown RBP eCLIP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 SPATA2LQ8IUW3 424 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 CCDC105Q8IYK2 499 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 DCP1BQ8IZD4 617 aaKnown RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 IFT81Q8WYA0 676 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 IRGQQ8WZA9 623 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 HSPH1Q92598 858 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FUBP3Q96I24 572 aaKnown RBP eCLIP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 SNRNP25Q9BV90 132 aaKnown RBP9.86□□□□□ -0.83
SF3B1-211ENST00000487698 CWH43Q9H720 699 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 FAM114A2Q9NRY5 505 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 NEU2Q9Y3R4 380 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 USP3Q9Y6I4 520 aa9.86□□□□□ -0.83
SF3B1-211ENST00000487698 OR6C75A6NL08 312 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ZNF487B1APH4 448 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 TNFRSF10BO14763 440 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 LIASO43766 372 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 TBC1D4O60343 1298 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ECEL1O95672 775 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 USP17L7P0C7H9 530 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 HSPA1AP0DMV8 641 aaKnown RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 HSPA1BP0DMV9 641 aaKnown RBP9.85□□□□□ -0.83
SF3B1-211ENST00000487698 PBX3P40426 434 aa9.85□□□□□ -0.83
SF3B1-211ENST00000487698 ATXN1P54253 815 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms