RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 EHBP1Q8NDI1 1231 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 LMO3Q8TAP4 145 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 OSER1Q9NX31 292 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 SH3BP1Q9Y3L3 701 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 ZFHX2Q9C0A1 2572 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-209ENST00000487617 TBX18O95935 607 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 LMNAP02545 664 aaKnown RBP21.53■■□□□ 1.04
HDAC4-209ENST00000487617 CYP17A1P05093 508 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 IRF1P10914 325 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 DRD1P21728 446 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 CCDC186Q7Z3E2 898 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 PIGZQ86VD9 579 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 TTC30AQ86WT1 665 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 ADGRG2Q8IZP9 1017 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 ZBTB44Q8NCP5 570 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 NELL1Q92832 810 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 KAT5Q92993 513 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 FAM126AQ9BYI3 521 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-209ENST00000487617 UBXN6Q9BZV1 441 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 NUP62CLQ9H1M0 184 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 NMUR1Q9HB89 426 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 CYLDQ9NQC7 956 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 TBC1D14Q9P2M4 693 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 HESX1Q9UBX0 185 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 NAGPAQ9UK23 515 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 TSPAN16Q9UKR8 245 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 PCDHB4Q9Y5E5 795 aa21.53■■□□□ 1.04
HDAC4-209ENST00000487617 VDRP11473 427 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 TDGF1P13385 188 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 RARGP13631 454 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 ATP5C1P36542 298 aaKnown RBP21.52■■□□□ 1.04
HDAC4-209ENST00000487617 NRLP54845 237 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 DHCR24Q15392 516 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 TMEM270Q6UE05 265 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 RRAGAQ7L523 313 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 CNOT6LQ96LI5 555 aaKnown RBP21.52■■□□□ 1.04
HDAC4-209ENST00000487617 MED15Q96RN5 788 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 INTS2Q9H0H0 1204 aaKnown RBP21.52■■□□□ 1.04
HDAC4-209ENST00000487617 KIAA1257Q9ULG3 409 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 USP3Q9Y6I4 520 aa21.52■■□□□ 1.04
HDAC4-209ENST00000487617 HELZP42694 1942 aaKnown RBP21.52■■□□□ 1.04
HDAC4-209ENST00000487617 MYH10P35580 1976 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 PSEN1P49768 467 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 BCAT1P54687 386 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 TPD52L1Q16890 204 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-209ENST00000487617 FBXO43Q4G163 708 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 C10orf120Q5SQS8 335 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 SCD5Q86SK9 330 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 ARHGEF19Q8IW93 802 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 KLF16Q9BXK1 252 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-209ENST00000487617 LMBRD1Q9NUN5 540 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.51■■□□□ 1.03
HDAC4-209ENST00000487617 C2orf42Q9NWW7 574 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 NUDT5Q9UKK9 219 aa21.51■■□□□ 1.03
HDAC4-209ENST00000487617 XPO1O14980 1071 aaKnown RBP21.5■■□□□ 1.03
HDAC4-209ENST00000487617 ATG13O75143 517 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 RNF40O75150 1001 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 PAPSS2O95340 614 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-209ENST00000487617 ADH1CP00326 375 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 PAEPP09466 180 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 RALAP11233 206 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 OPRD1P41143 372 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 PDE4CQ08493 712 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 GOLGA8FQ08AF8 430 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 GOLGA8DPQ0D2H9 430 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 BST2Q10589 180 aaKnown RBP21.5■■□□□ 1.03
HDAC4-209ENST00000487617 RAB41Q5JT25 222 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 PKN3Q6P5Z2 889 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 RHBDF2Q6PJF5 856 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 TADA2BQ86TJ2 420 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 BBS7Q8IWZ6 715 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 UBA3Q8TBC4 463 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 WBP2Q969T9 261 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 OTUB2Q96DC9 234 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 DNMT3LQ9UJW3 386 aa21.5■■□□□ 1.03
HDAC4-209ENST00000487617 K7ESF4 209 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 RNF225M0QZC1 329 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-209ENST00000487617 TULP2O00295 520 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 O00370 1275 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 MDM4O15151 490 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 LILRB5O75023 590 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 ADH5P11766 374 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 TKTL1P51854 596 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 GCNT1Q02742 428 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 GAB4Q2WGN9 574 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 LY6G5CQ5SRR4 150 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 KLHDC10Q6PID8 442 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 ARHGAP18Q8N392 663 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 RBBP8NLQ8NC74 664 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-209ENST00000487617 TFAP2BQ92481 460 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 GBP4Q96PP9 640 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 CLIC5Q9NZA1 410 aa21.49■■□□□ 1.03
HDAC4-209ENST00000487617 LSM7Q9UK45 103 aaKnown RBP21.49■■□□□ 1.03
HDAC4-209ENST00000487617 CHURC1-FNTBB4DL54 471 aa21.48■■□□□ 1.03
HDAC4-209ENST00000487617 PLA2G4AP47712 749 aa21.48■■□□□ 1.03
HDAC4-209ENST00000487617 FNTBP49356 437 aa21.48■■□□□ 1.03
HDAC4-209ENST00000487617 DMWDQ09019 674 aa21.48■■□□□ 1.03
HDAC4-209ENST00000487617 DPCR1Q3MIW9 517 aa21.48■■□□□ 1.03
HDAC4-209ENST00000487617 LCLAT1Q6UWP7 414 aa21.48■■□□□ 1.03
HDAC4-209ENST00000487617 HTR3DQ70Z44 454 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms