RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 DUOXA1Q1HG43 343 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 C10orf76Q5T2E6 689 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 EPM2AIP1Q7L775 607 aaPredicted RBP20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 TERB1Q8NA31 727 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 SCAMP5Q8TAC9 235 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 CEP76Q8TAP6 659 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 WBP2Q969T9 261 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 TRIM9Q9C026 710 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 GZF1Q9H116 711 aaPredicted RBP20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 CCSER2Q9H7U1 834 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 SPHK2Q9NRA0 654 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 CALCOCO1Q9P1Z2 691 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 NXF1Q9UBU9 619 aaKnown RBP20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 MSRB2Q9Y3D2 182 aa20.64■□□□□ 0.89
SMPDL3A-202ENST00000487215 WDFY3Q8IZQ1 3526 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 TRIM24O15164 1050 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 HOXB2P14652 356 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 CYP2J2P51589 502 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 SLC5A3P53794 718 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 ANO4Q32M45 955 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 PREPLQ4J6C6 727 aaPredicted RBP20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 SNX30Q5VWJ9 437 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 SLC36A4Q6YBV0 504 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 FAM35AQ86V20 835 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 TMEM25Q86YD3 366 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 MIB1Q86YT6 1006 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 HDDC3Q8N4P3 179 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 ZNF507Q8TCN5 953 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 ZNF516Q92618 1163 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 DUSP9Q99956 384 aaKnown RBP20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 XYLT2Q9H1B5 865 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 CAPN10Q9HC96 672 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 KBTBD4Q9NVX7 518 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 MYOFQ9NZM1 2061 aa20.63■□□□□ 0.89
SMPDL3A-202ENST00000487215 ATP8B3O60423 1300 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 A0A1W2PQF6 199 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 CLIC2O15247 247 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 SERPINF2P08697 491 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 SYT1P21579 422 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 WASP42768 502 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 TUBP50607 506 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 GFPT1Q06210 699 aaPredicted RBP20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 ZNF33AQ06730 810 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 TRPC3Q13507 836 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 E2F4Q16254 413 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 PAQR9Q6ZVX9 377 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 XXYLT1Q8NBI6 393 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 LRRC27Q9C0I9 530 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 SMYD3Q9H7B4 428 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 IL37Q9NZH6 218 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 GMIPQ9P107 970 aa20.62■□□□□ 0.89
SMPDL3A-202ENST00000487215 IGHV1OR15-9A0A0B4J2B8 117 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 ZDHHC11BP0C7U3 371 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 IRF1P10914 325 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 NTSR1P30989 418 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 ATICP31939 592 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 CDH8P55286 799 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 FAM193AP78312 1265 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 ASIC1P78348 528 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 FAM26FQ5R3K3 315 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 EGFLAMQ63HQ2 1017 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 NUDT18Q6ZVK8 323 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 NELFCDQ8IXH7 590 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 MINDY1Q8N5J2 469 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 OR2I1PQ8NGU4 316 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 SYAP1Q96A49 352 aaPredicted RBP20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 MED10Q9BTT4 135 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 DMAP1Q9NPF5 467 aaPredicted RBP20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 STARD13Q9Y3M8 1113 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 PCDH15Q96QU1 1955 aa20.61■□□□□ 0.89
SMPDL3A-202ENST00000487215 FAM92AA1XBS5 289 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 OPHN1O60890 802 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 GRAMD4Q6IC98 578 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 RABEPKQ7Z6M1 372 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 SLC41A1Q8IVJ1 513 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 SCFD1Q8WVM8 642 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 SMARCD1Q96GM5 515 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 ACOX2Q99424 681 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 NACA2Q9H009 215 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 CD248Q9HCU0 757 aa20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 DNAJC17Q9NVM6 304 aaKnown RBP20.6■□□□□ 0.89
SMPDL3A-202ENST00000487215 UBE4BO95155 1302 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 H0Y626 953 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 ARHGAP33O14559 1287 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 TRIM16O95361 564 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 NDUFV2P19404 249 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 NASPP49321 788 aaPredicted RBP20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 PGFP49763 221 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 RING1Q06587 406 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 IPO4Q8TEX9 1081 aaKnown RBP20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 ERLEC1Q96DZ1 483 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 CUEDC2Q9H467 287 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 VRTNQ9H8Y1 702 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 KRT82Q9NSB4 513 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 COMMD8Q9NX08 183 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 CYP8B1Q9UNU6 501 aa20.59■□□□□ 0.89
SMPDL3A-202ENST00000487215 ZFYVE26Q68DK2 2539 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 GREM1O60565 184 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 TLR5O60602 858 aa20.58■□□□□ 0.89
SMPDL3A-202ENST00000487215 PHACTR2O75167 634 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms