RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 TFAP2BQ92481 460 aa23.58■■□□□ 1.37
CDHR3-212ENST00000487084 KREMEN1Q96MU8 473 aa23.58■■□□□ 1.37
CDHR3-212ENST00000487084 NMUR1Q9HB89 426 aa23.58■■□□□ 1.37
CDHR3-212ENST00000487084 KIAA1257Q9ULG3 409 aa23.58■■□□□ 1.37
CDHR3-212ENST00000487084 TULP2O00295 520 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 MBD3O95983 291 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 RARGP13631 454 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 PRKCSHP14314 528 aaPredicted RBP23.57■■□□□ 1.36
CDHR3-212ENST00000487084 GJA4P35212 333 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 ATP5C1P36542 298 aaKnown RBP23.57■■□□□ 1.36
CDHR3-212ENST00000487084 MAN2A1Q16706 1144 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 TRIM65Q6PJ69 517 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 CCDC186Q7Z3E2 898 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 ALYREFQ86V81 257 aaKnown RBP23.57■■□□□ 1.36
CDHR3-212ENST00000487084 ZFRQ96KR1 1074 aaKnown RBP23.57■■□□□ 1.36
CDHR3-212ENST00000487084 UBXN6Q9BZV1 441 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 LRRC4Q9HBW1 653 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 NUDT5Q9UKK9 219 aa23.57■■□□□ 1.36
CDHR3-212ENST00000487084 M0QYV0 167 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 PES1O00541 588 aaKnown RBP23.56■■□□□ 1.36
CDHR3-212ENST00000487084 SLC9A3R1O14745 358 aaPredicted RBP23.56■■□□□ 1.36
CDHR3-212ENST00000487084 XPO1O14980 1071 aaKnown RBP23.56■■□□□ 1.36
CDHR3-212ENST00000487084 SLC9A1P19634 815 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 TKTL1P51854 596 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 CSTF1Q05048 431 aaKnown RBP23.56■■□□□ 1.36
CDHR3-212ENST00000487084 GRSF1Q12849 480 aaKnown RBP eCLIP23.56■■□□□ 1.36
CDHR3-212ENST00000487084 EXOC3L4Q17RC7 722 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 DGKKQ5KSL6 1271 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 C10orf120Q5SQS8 335 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 NAIF1Q69YI7 327 aaPredicted RBP23.56■■□□□ 1.36
CDHR3-212ENST00000487084 GJB7Q6PEY0 223 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 SASS6Q6UVJ0 657 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 Q6ZS52 159 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 CHFRQ96EP1 664 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 CYLDQ9NQC7 956 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 USP3Q9Y6I4 520 aa23.56■■□□□ 1.36
CDHR3-212ENST00000487084 KCNJ18B7U540 433 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 MDM4O15151 490 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 SP9P0CG40 484 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 RALAP11233 206 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 PSEN1P49768 467 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 MFAP3P55082 362 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 APBA1Q02410 837 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 KCNJ12Q14500 433 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 CT47A1Q5JQC4 288 aaPredicted RBP23.55■■□□□ 1.36
CDHR3-212ENST00000487084 RAB41Q5JT25 222 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 LCLAT1Q6UWP7 414 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 RBM43Q6ZSC3 357 aaKnown RBP23.55■■□□□ 1.36
CDHR3-212ENST00000487084 SCD5Q86SK9 330 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 MAML2Q8IZL2 1156 aaPredicted RBP23.55■■□□□ 1.36
CDHR3-212ENST00000487084 EXOC4Q96A65 974 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 P2RY13Q9BPV8 354 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 TUBGCP2Q9BSJ2 902 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 ULBP1Q9BZM6 244 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 SAMSN1Q9NSI8 373 aaKnown RBP23.55■■□□□ 1.36
CDHR3-212ENST00000487084 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.55■■□□□ 1.36
CDHR3-212ENST00000487084 NFE2L3Q9Y4A8 694 aa23.55■■□□□ 1.36
CDHR3-212ENST00000487084 CACNA1IQ9P0X4 2223 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 E2F8A0AVK6 867 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 TRDMT1O14717 391 aaKnown RBP23.54■■□□□ 1.36
CDHR3-212ENST00000487084 CYP17A1P05093 508 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 SETSIPP0DME0 302 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 USP8P40818 1118 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 MRE11P49959 708 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 ZNF132P52740 706 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 GOLGA8FQ08AF8 430 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 GOLGA8DPQ0D2H9 430 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 ADIGQ0VDE8 80 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 CCINQ13939 588 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 STILQ15468 1287 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 ARHGAP44Q17R89 818 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 TMEM196Q5HYL7 178 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 CCDC183Q5T5S1 534 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 FSTL4Q6MZW2 842 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 ENOSF1Q7L5Y1 443 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 TADA2BQ86TJ2 420 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 SIX6OS1Q8N1H7 587 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 SECISBP2LQ93073 1101 aaKnown RBP23.54■■□□□ 1.36
CDHR3-212ENST00000487084 ZSWIM1Q9BR11 485 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 IER2Q9BTL4 223 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 TBC1D14Q9P2M4 693 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 DNMT3LQ9UJW3 386 aa23.54■■□□□ 1.36
CDHR3-212ENST00000487084 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.54■■□□□ 1.36
CDHR3-212ENST00000487084 GTPBP10A4D1E9 387 aaKnown RBP23.53■■□□□ 1.36
CDHR3-212ENST00000487084 ZBED1O96006 694 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 NBL1P41271 181 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 PLA2G4AP47712 749 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 RGS7P49802 495 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 GALK1P51570 392 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 YWHAGP61981 247 aaKnown RBP eCLIP23.53■■□□□ 1.36
CDHR3-212ENST00000487084 DHCR24Q15392 516 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 CNGA2Q16280 664 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 VWA3BQ502W6 1294 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 TSSK4Q6SA08 328 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 MIB1Q86YT6 1006 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 ARHGAP18Q8N392 663 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 KIAA1958Q8N8K9 716 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 NDRG1Q92597 394 aaKnown RBP23.53■■□□□ 1.36
CDHR3-212ENST00000487084 CD101Q93033 1021 aa23.53■■□□□ 1.36
CDHR3-212ENST00000487084 WBP2Q969T9 261 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms