RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 GRAMD2AQ8IUY3 354 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 MIER2Q8N344 545 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 SYT2Q8N9I0 419 aaPredicted RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 CCDC112Q8NEF3 446 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 OR56A1Q8NGH5 318 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 RASSF8Q8NHQ8 419 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 KLHDC4Q8TBB5 520 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 ATP6V0A1Q93050 837 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 HVCN1Q96D96 273 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 ZSWIM1Q9BR11 485 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 EIF2AQ9BY44 585 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 TTC12Q9H892 705 aaPredicted RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 PAPOLBQ9NRJ5 636 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 KCTD5Q9NXV2 234 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 VSX1Q9NZR4 365 aaPredicted RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 HESX1Q9UBX0 185 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 ZNF69Q9UC07 566 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 HDAC9Q9UKV0 1011 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 TMCO1Q9UM00 188 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 MAP3K2Q9Y2U5 619 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 MRPL11Q9Y3B7 192 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 REXO2Q9Y3B8 237 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 RABGAP1Q9Y3P9 1069 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 DAAM1Q9Y4D1 1078 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 CFAP20Q9Y6A4 193 aaKnown RBP5.88□□□□□ -1.47
COPS3-209ENST00000486810 CEP162Q5TB80 1403 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 YEATS2Q9ULM3 1422 aa5.88□□□□□ -1.47
COPS3-209ENST00000486810 CDHR4A6H8M9 788 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 TMEM247A6NEH6 219 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 KIAA0391O15091 583 aaKnown RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 GRM6O15303 877 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 SNX2O60749 519 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 IL33O95760 270 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 PF4V1P10720 104 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 IDEP14735 1019 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 PRKAR2BP31323 418 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 CSTF2P33240 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
COPS3-209ENST00000486810 HSPA1LP34931 641 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 HOXD12P35452 270 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 SNX16P57768 344 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 TUBA4AP68366 448 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 NOMO3P69849 1222 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 DR1Q01658 176 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 SLFN5Q08AF3 891 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 SNAPC2Q13487 334 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 PIN1Q13526 163 aaPredicted RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 KHDC1Q4VXA5 237 aaKnown RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 BEND6Q5SZJ8 279 aaPredicted RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 SPATA1Q5VX52 437 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 TSHZ3Q63HK5 1081 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 B3GNTL1Q67FW5 361 aaPredicted RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 MIS18BP1Q6P0N0 1132 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 USP45Q70EL2 814 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 LRRC43Q8N309 656 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 TEX19Q8NA77 164 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 GDAP1Q8TB36 358 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 CCDC110Q8TBZ0 833 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 SGCDQ92629 289 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 KAT2BQ92831 832 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 HAS1Q92839 578 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 SDCCAG3Q96C92 435 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 MYEOVQ96EZ4 313 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 C8orf48Q96LL4 319 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 SERINC2Q96SA4 455 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 VRK1Q99986 396 aaPredicted RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 TCP11L1Q9NUJ3 509 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 FKBP14Q9NWM8 211 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 IL1RAPL1Q9NZN1 696 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 ADAM21Q9UKJ8 722 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 BZW2Q9Y6E2 419 aaKnown RBP5.87□□□□□ -1.47
COPS3-209ENST00000486810 PPIP5K1Q6PFW1 1433 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 CECR2Q9BXF3 1484 aa5.87□□□□□ -1.47
COPS3-209ENST00000486810 NLRP1Q9C000 1473 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 EIF3AQ14152 1382 aaKnown RBP5.86□□□□□ -1.47
COPS3-209ENST00000486810 AATKQ6ZMQ8 1374 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 ELP1O95163 1332 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 GAGE12HA6NDE8 117 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 B4DLN1 442 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 NT5C1B-RDH14C9J2C7 533 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 RNASET2O00584 256 aaKnown RBP5.86□□□□□ -1.47
COPS3-209ENST00000486810 WDR46O15213 610 aaKnown RBP5.86□□□□□ -1.47
COPS3-209ENST00000486810 SKAP2O75563 359 aaPredicted RBP5.86□□□□□ -1.47
COPS3-209ENST00000486810 TCEA3O75764 348 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 BAIAP3O94812 1187 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 NDUFA10O95299 355 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 CAVIN2O95810 425 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 CFIP05156 583 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 EZRP15311 586 aaKnown RBP5.86□□□□□ -1.47
COPS3-209ENST00000486810 ATF7P17544 494 aaPredicted RBP5.86□□□□□ -1.47
COPS3-209ENST00000486810 MAKP20794 623 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 MCM7P33993 719 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 HSPA4P34932 840 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 PTGS2P35354 604 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 GNL1P36915 607 aaPredicted RBP5.86□□□□□ -1.47
COPS3-209ENST00000486810 GDF5P43026 501 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 OCA2Q04671 838 aa5.86□□□□□ -1.47
COPS3-209ENST00000486810 ABHD18Q0P651 414 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms