RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DNAJB7Q7Z6W7 309 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-229ENST00000486665 XYLT1Q86Y38 959 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 FBXL6Q8N531 539 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 ULBP1Q9BZM6 244 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 SMOC2Q9H3U7 446 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 LRRC4Q9HBW1 653 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 CYLDQ9NQC7 956 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-229ENST00000486665 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
HDAC6-229ENST00000486665 A0A0U1RQJ8 604 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 RCCD1A6NED2 376 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 GJB6O95452 261 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 LRG1P02750 347 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 H2AFZP0C0S5 128 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 USP17L7P0C7H9 530 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 ABCB4P21439 1286 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 RRM1P23921 792 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 ACADSBP45954 432 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 PGFP49763 221 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 IFRD2Q12894 506 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-229ENST00000486665 SPA17Q15506 151 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 TAF5Q15542 800 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 PM20D1Q6GTS8 502 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 OR6B2Q6IFH4 312 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 FAM183BPQ6ZVS7 135 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 H2AFVQ71UI9 128 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 RTL10Q7L3V2 364 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 BHLHA9Q7RTU4 235 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 ATRIPQ8WXE1 791 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 ZNF707Q96C28 371 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-229ENST00000486665 ARHGEF26Q96DR7 871 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 CEP295NLQ96MC4 621 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 THAP2Q9H0W7 228 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 SYNCQ9H7C4 482 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 PYCARDQ9ULZ3 195 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 MAGED2Q9UNF1 606 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-229ENST00000486665 ADGRG1Q9Y653 693 aa13.43□□□□□ -0.26
HDAC6-229ENST00000486665 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDAC6-229ENST00000486665 CCDC195A0A1B0GUA6 201 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 TCRBV5S1A1TA0A578 114 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 GOLGA8SH3BPF8 625 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-229ENST00000486665 ZBED1O96006 694 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 CALB1P05937 261 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 YWHAQP27348 245 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 DAOAP59103 153 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 TAF10Q12962 218 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 PLD1Q13393 1074 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 ZNF268Q14587 947 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-229ENST00000486665 C10orf76Q5T2E6 689 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 PPP1R2P3Q6NXS1 205 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 SCD5Q86SK9 330 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 SUGP1Q8IWZ8 645 aaKnown RBP13.42□□□□□ -0.26
HDAC6-229ENST00000486665 SIX6OS1Q8N1H7 587 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 CASP10Q92851 521 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 PSMG2Q969U7 264 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 MCRS1Q96EZ8 462 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 PIWIL1Q96J94 861 aaKnown RBP13.42□□□□□ -0.26
HDAC6-229ENST00000486665 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 ZNF512Q96ME7 567 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-229ENST00000486665 TTLL2Q9BWV7 592 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 LRRC3Q9BY71 257 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 PRKD2Q9BZL6 878 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 ZNF334Q9HCZ1 680 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-229ENST00000486665 HCFC1R1Q9NWW0 138 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 COMMD8Q9NX08 183 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 MYO1AQ9UBC5 1043 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 CNOT8Q9UFF9 292 aaKnown RBP13.42□□□□□ -0.26
HDAC6-229ENST00000486665 DPP7Q9UHL4 492 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 SCML2Q9UQR0 700 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 ASB3Q9Y575 518 aa13.42□□□□□ -0.26
HDAC6-229ENST00000486665 VPS13AQ96RL7 3174 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 FAM92AA1XBS5 289 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 YJEFN3A6XGL0 299 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 E7ENQ6 273 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 NRG2O14511 850 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-229ENST00000486665 NRDCO43847 1150 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 FBXO21O94952 628 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 RTN3O95197 1032 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-229ENST00000486665 PAPLNO95428 1278 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 HNRNPA1P09651 372 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC6-229ENST00000486665 TMEM253P0C7T8 217 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 CSH1P0DML2 217 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 CSH2P0DML3 217 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 HOXA9P31269 272 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 PTPN5P54829 565 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 GPC5P78333 572 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 VEPH1Q14D04 833 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 OLFML1Q6UWY5 402 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 TMC5Q6UXY8 1006 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 ITIH5Q86UX2 942 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 TMC8Q8IU68 726 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 MSANTD4Q8NCY6 345 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 IPO4Q8TEX9 1081 aaKnown RBP13.41□□□□□ -0.26
HDAC6-229ENST00000486665 ZNF653Q96CK0 615 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 MYRFLQ96LU7 910 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms