RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 IGHV1OR15-9A0A0B4J2B8 117 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 KIAA0391O15091 583 aaKnown RBP15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 TNNC2P02585 160 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 YWHAQP27348 245 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 GAD2Q05329 585 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 ZNF33AQ06730 810 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 SURF1Q15526 300 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 HS2ST1Q7LGA3 356 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 NUP93Q8N1F7 819 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 OR6B3Q8NGW1 331 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 ZNF507Q8TCN5 953 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 SPACA7Q96KW9 195 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 CAMK1GQ96NX5 476 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 SLC32A1Q9H598 525 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 EHD2Q9NZN4 543 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 CALCOCO1Q9P1Z2 691 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 BCCIPQ9P287 314 aaKnown RBP eCLIP15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 TBC1D14Q9P2M4 693 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 CIZ1Q9ULV3 898 aaPredicted RBP15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 LHX6Q9UPM6 363 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 MORC2Q9Y6X9 1032 aaPredicted RBP15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 URB1O60287 2271 aaKnown RBP15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 KNTC1P50748 2209 aa15.16■□□□□ 0.02
SDCCAG3-211ENST00000486441 PLXNB3Q9ULL4 1909 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 GOLGA4Q13439 2230 aaKnown RBP15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 TBC1D3BA6NDS4 549 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 PRRT4C9JH25 899 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 ARHGAP33O14559 1287 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 STAU1O95793 577 aaKnown RBP15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 CFIP05156 583 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 NEFLP07196 543 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 WASP42768 502 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 BYSLQ13895 437 aaKnown RBP15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 E2F4Q16254 413 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 WDR72Q3MJ13 1102 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 MINDY1Q8N5J2 469 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 ZNF513Q8N8E2 541 aaPredicted RBP15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 TERB1Q8NA31 727 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 ZMIZ2Q8NF64 920 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 CEP76Q8TAP6 659 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 PLEKHO2Q8TD55 490 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 OVCA2Q8WZ82 227 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 OTUB2Q96DC9 234 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 SLITRK1Q96PX8 696 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 SPHK2Q9NRA0 654 aa15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 DNAAF2Q9NVR5 837 aaKnown RBP15.15■□□□□ 0.02
SDCCAG3-211ENST00000486441 CISD3P0C7P0 127 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 NDUFV2P19404 249 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 NTSR1P30989 418 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 CDH8P55286 799 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 MYL6P60660 151 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 RPL6Q02878 288 aaKnown RBP15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 CYP24A1Q07973 514 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 IFRD2Q12894 506 aaPredicted RBP15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 CUL4AQ13619 759 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 PSMD6Q15008 389 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 SNRNP35Q16560 246 aaKnown RBP15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 HECTD3Q5T447 861 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 EGFLAMQ63HQ2 1017 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 CCDC73Q6ZRK6 1079 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 PROSER1Q86XN7 944 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 DDX42Q86XP3 938 aaKnown RBP eCLIP15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 PGBD3Q8N328 593 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 RDH13Q8NBN7 331 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 B3GALNT2Q8NCR0 500 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 ZNF419Q96HQ0 510 aaPredicted RBP15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 USP28Q96RU2 1077 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 GTPBP2Q9BX10 602 aaKnown RBP15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 SDCBP2Q9H190 292 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 SLC6A17Q9H1V8 727 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 SNX25Q9H3E2 840 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 KBTBD4Q9NVX7 518 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 DEC1Q9P2X7 70 aa15.14■□□□□ 0.01
SDCCAG3-211ENST00000486441 CLIC2O15247 247 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 AP5Z1O43299 807 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 SH3BP5O60239 455 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 BEST1O76090 585 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 TBX18O95935 607 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 STAT6P42226 847 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 DPP6P42658 865 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 CEBPZQ03701 1054 aaKnown RBP15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 GFPT1Q06210 699 aaPredicted RBP15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 EHHADHQ08426 723 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 ACAP1Q15027 740 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 SLC39A14Q15043 492 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 C10orf76Q5T2E6 689 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 TOGARAM2Q6ZUX3 1019 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 HTR3DQ70Z44 454 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 FUKQ8N0W3 1084 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 IPO4Q8TEX9 1081 aaKnown RBP15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 FBXO32Q969P5 355 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 ERLEC1Q96DZ1 483 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 CGRRF1Q99675 332 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 GABRG3Q99928 467 aa15.13■□□□□ 0.01
SDCCAG3-211ENST00000486441 KLF16Q9BXK1 252 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms