RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 PSMC2P35998 433 aaKnown RBP23.71■■□□□ 1.39
SREBF1-214ENST00000486311 PGFP49763 221 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 DGKEP52429 567 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 MESP2Q0VG99 397 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 SF3A2Q15428 464 aaKnown RBP23.71■■□□□ 1.39
SREBF1-214ENST00000486311 CCDC6Q16204 474 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 AASDHQ4L235 1098 aaPredicted RBP23.71■■□□□ 1.39
SREBF1-214ENST00000486311 LY6G5CQ5SRR4 150 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 RASSF3Q86WH2 238 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 FAM186BQ8IYM0 893 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 TAS1R2Q8TE23 839 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 HNRNPABQ99729 332 aaKnown RBP23.71■■□□□ 1.39
SREBF1-214ENST00000486311 SH3BP1Q9Y3L3 701 aa23.71■■□□□ 1.39
SREBF1-214ENST00000486311 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.7■■□□□ 1.38
SREBF1-214ENST00000486311 DCLK1O15075 740 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 RHOBTB1O94844 696 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 KRT13P13646 458 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 MPLP40238 635 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 GRIA2P42262 883 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 LIMK1P53667 647 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 MCCD1P59942 119 aaPredicted RBP23.7■■□□□ 1.38
SREBF1-214ENST00000486311 GAD2Q05329 585 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 ELF2Q15723 593 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 CRY1Q16526 586 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 HSF5Q4G112 596 aaPredicted RBP23.7■■□□□ 1.38
SREBF1-214ENST00000486311 ZCWPW2Q504Y3 356 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 SFTPA1Q8IWL2 248 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 CCDC33Q8N5R6 958 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 C12orf50Q8NA57 414 aaPredicted RBP23.7■■□□□ 1.38
SREBF1-214ENST00000486311 CNOT6LQ96LI5 555 aaKnown RBP23.7■■□□□ 1.38
SREBF1-214ENST00000486311 NT5C1AQ9BXI3 368 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 NACA2Q9H009 215 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.7■■□□□ 1.383e-6■■■□□ 16.8
SREBF1-214ENST00000486311 ARHGEF4Q9NR80 690 aa23.7■■□□□ 1.38
SREBF1-214ENST00000486311 HOXC11O43248 304 aaPredicted RBP23.69■■□□□ 1.38
SREBF1-214ENST00000486311 TLR5O60602 858 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 ZNF202O95125 648 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 ADORA2BP29275 332 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 ADAM9Q13443 819 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 USP39Q53GS9 565 aaKnown RBP23.69■■□□□ 1.38
SREBF1-214ENST00000486311 CLEC20AQ6ZU45 233 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 C11orf74Q86VG3 221 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 BBS7Q8IWZ6 715 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 ETFBKMTQ8IXQ9 262 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 PHTF2Q8N3S3 785 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 NIF3L1Q9GZT8 377 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 TLR8Q9NR97 1041 aaKnown RBP23.69■■□□□ 1.38
SREBF1-214ENST00000486311 VPS45Q9NRW7 570 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 SCML2Q9UQR0 700 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 SDK1Q7Z5N4 2213 aa23.69■■□□□ 1.38
SREBF1-214ENST00000486311 ATG2BQ96BY7 2078 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 HHLA1C9JL84 531 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 CILPO75339 1184 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 GTF2H1P32780 548 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 ANP32AP39687 249 aaKnown RBP23.68■■□□□ 1.38
SREBF1-214ENST00000486311 TNFRSF4P43489 277 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 KIR2DL1P43626 348 aaPredicted RBP23.68■■□□□ 1.38
SREBF1-214ENST00000486311 ANO7Q6IWH7 933 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 GPRIN1Q7Z2K8 1008 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 ALLCQ8N6M5 410 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 IL17RCQ8NAC3 791 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 TXNDC5Q8NBS9 432 aaKnown RBP23.68■■□□□ 1.38
SREBF1-214ENST00000486311 WHAMMQ8TF30 809 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 WBP2Q969T9 261 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 CYFIP2Q96F07 1278 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 TPSD1Q9BZJ3 242 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 TMEM8AQ9HCN3 771 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 PNPLA8Q9NP80 782 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 CYLDQ9NQC7 956 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 RXFP3Q9NSD7 469 aa23.68■■□□□ 1.38
SREBF1-214ENST00000486311 KLF8O95600 359 aaPredicted RBP23.67■■□□□ 1.38
SREBF1-214ENST00000486311 HNRNPLP14866 589 aaKnown RBP eCLIP23.67■■□□□ 1.38
SREBF1-214ENST00000486311 TIE1P35590 1138 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 KDSRQ06136 332 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 EDRF1Q3B7T1 1238 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 PPM1JQ5JR12 505 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 BTBD8Q5XKL5 378 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 TMEM92Q6UXU6 159 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 CCDC150Q8NCX0 1101 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 MDGA1Q8NFP4 955 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 DDX1Q92499 740 aaKnown RBP23.67■■□□□ 1.38
SREBF1-214ENST00000486311 KLF16Q9BXK1 252 aaPredicted RBP23.67■■□□□ 1.38
SREBF1-214ENST00000486311 MMRN2Q9H8L6 949 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 SPHK2Q9NRA0 654 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 PCDHA5Q9Y5H7 936 aa23.67■■□□□ 1.38
SREBF1-214ENST00000486311 SGK1O00141 431 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 GREM1O60565 184 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 ALDH1A2O94788 518 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 TBX18O95935 607 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 IRF1P10914 325 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 CD58P19256 250 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 EMC10Q5UCC4 262 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 KRT39Q6A163 491 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 IL31Q6EBC2 164 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 HTR3DQ70Z44 454 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 TMEM25Q86YD3 366 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 CCDC34Q96HJ3 373 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 SMOC1Q9H4F8 434 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 GDPD2Q9HCC8 539 aa23.66■■□□□ 1.38
SREBF1-214ENST00000486311 OSER1Q9NX31 292 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms