RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CDK5RAP1Q96SZ6 601 aaKnown RBP11.97□□□□□ -0.49
NUP50-216ENST00000486184 TRIM62Q9BVG3 475 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 GDE1Q9NZC3 331 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 IL37Q9NZH6 218 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 IMPACTQ9P2X3 320 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 PRKAG3Q9UGI9 489 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 CHORDC1Q9UHD1 332 aaPredicted RBP11.97□□□□□ -0.49
NUP50-216ENST00000486184 NAGPAQ9UK23 515 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 CDH7Q9ULB5 785 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 USTQ9Y2C2 406 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 USP3Q9Y6I4 520 aa11.97□□□□□ -0.49
NUP50-216ENST00000486184 TRAV19A0A0A6YYK7 116 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 FAM170AA1A519 330 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 FAM92AA1XBS5 289 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 SOBPA7XYQ1 873 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 CYP1A1P04798 512 aaPredicted RBP11.96□□□□□ -0.49
NUP50-216ENST00000486184 CALB1P05937 261 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 CKMP06732 381 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 CHRNB2P17787 502 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 HNRNPH3P31942 346 aaKnown RBP11.96□□□□□ -0.49
NUP50-216ENST00000486184 YWHAGP61981 247 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUP50-216ENST00000486184 CLEC16AQ2KHT3 1053 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 HECTD3Q5T447 861 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 BTBD8Q5XKL5 378 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 OR6B2Q6IFH4 312 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 TOGARAM2Q6ZUX3 1019 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 RSRC2Q7L4I2 434 aaKnown RBP11.96□□□□□ -0.49
NUP50-216ENST00000486184 ZNF571Q7Z3V5 609 aaPredicted RBP11.96□□□□□ -0.49
NUP50-216ENST00000486184 ZDHHC17Q8IUH5 632 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
NUP50-216ENST00000486184 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 NPAS3Q8IXF0 933 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 SCML4Q8N228 414 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 MAB21L3Q8N8X9 362 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 IRGQQ8WZA9 623 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 FAM149B1Q96BN6 582 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 C18orf8Q96DM3 657 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 CPXM1Q96SM3 734 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 TASP1Q9H6P5 420 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 CYTH4Q9UIA0 394 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 STRIP2Q9ULQ0 834 aa11.96□□□□□ -0.49
NUP50-216ENST00000486184 A0A1W2PQH9 124 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 ZNF840PA6NDX5 716 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 TMCO5BA8MYB1 307 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 DPYSL4O14531 572 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 CAPN9O14815 690 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 AKR1B10O60218 316 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 TADA3O75528 432 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 LTFP02788 710 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 PFKLP17858 780 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 RPL34P49207 117 aaKnown RBP11.95□□□□□ -0.5
NUP50-216ENST00000486184 DAOAP59103 153 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 CENPCQ03188 943 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 ARID5BQ14865 1188 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 PTPN20Q4JDL3 420 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 EFHC1Q5JVL4 640 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 STXBP5Q5T5C0 1151 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 HGSNATQ68CP4 663 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 TXNDC8Q6A555 127 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 PM20D1Q6GTS8 502 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 MMS22LQ6ZRQ5 1243 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 MTSS1LQ765P7 747 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 TMEM150AQ86TG1 271 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 TMEM110Q86TL2 294 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 ADHFE1Q8IWW8 467 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 WDTC1Q8N5D0 677 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 SLC30A5Q8TAD4 765 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 ZSCAN18Q8TBC5 510 aaPredicted RBP11.95□□□□□ -0.5
NUP50-216ENST00000486184 RNF139Q8WU17 664 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 CCDC42Q96M95 316 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 MYADMQ96S97 322 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 PCDHB18PQ96TA0 734 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 C11orf70Q9BRQ4 267 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 ABCC13Q9NSE7 274 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 OLA1Q9NTK5 396 aaKnown RBP11.95□□□□□ -0.5
NUP50-216ENST00000486184 ADAM22Q9P0K1 906 aa11.95□□□□□ -0.5
NUP50-216ENST00000486184 C2orf78A6NCI8 922 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 C2CD4DB7Z1M9 353 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 PAPSS1O43252 624 aaPredicted RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 TLR5O60602 858 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 MOSPD3O75425 235 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 ERBB2P04626 1255 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 PLEKP08567 350 aaPredicted RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 MBL2P11226 248 aaPredicted RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 UNGP13051 313 aaPredicted RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 LAMP2P13473 410 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 RARGP13631 454 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 HDCP19113 662 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 ATP5C1P36542 298 aaKnown RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 EIF4A3P38919 411 aaKnown RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 TUBP50607 506 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 GSDMDP57764 484 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 SLC6A3Q01959 620 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 TJAP1Q5JTD0 557 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 C10orf120Q5SQS8 335 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 FAM102AQ5T9C2 384 aaPredicted RBP11.94□□□□□ -0.5
NUP50-216ENST00000486184 SNX30Q5VWJ9 437 aa11.94□□□□□ -0.5
NUP50-216ENST00000486184 ACAD10Q6JQN1 1059 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms