RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 KBTBD7Q8WVZ9 684 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 SYN2Q92777 582 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 C16orf45Q96MC5 204 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 PCMTD1Q96MG8 357 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 LINC00597Q9H2U6 94 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 SMOC1Q9H4F8 434 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 TRPC7Q9HCX4 862 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 CRTAC1Q9NQ79 661 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 RXFP3Q9NSD7 469 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 HSFX1Q9UBD0 423 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 ZNF292O60281 2723 aa9.98□□□□□ -0.81
TMEM39A-208ENST00000486159 GABRDO14764 452 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 TGFB1I1O43294 461 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 HUS1O60921 280 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 HOXB3P14651 431 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 BDNFP23560 247 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 WEE1P30291 646 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 CYLC1P35663 651 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 MLLT6P55198 1093 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ETF1P62495 437 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 KRT83P78385 493 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 TSPY1Q01534 308 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 POU5F1Q01860 360 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ENPEPQ07075 957 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ST3GAL2Q16842 350 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 SFTPA1Q8IWL2 248 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 REXO1L1PQ8IX06 675 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ADGRF2Q8IZF7 708 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 GPD1LQ8N335 351 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 CELF5Q8N6W0 485 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ARL14EPQ8N8R7 260 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 MYRIPQ8NFW9 859 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 NEK11Q8NG66 645 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 C2orf15Q8WU43 125 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ZNF516Q92618 1163 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ZNF560Q96MR9 790 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 ACBD6Q9BR61 282 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 DPEP3Q9H4B8 488 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 TDP1Q9NUW8 608 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 TMEM30AQ9NV96 361 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 DMAC2Q9NW81 257 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 TRMT1Q9NXH9 659 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 GDAP2Q9NXN4 497 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 OBP2AQ9NY56 170 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 MYO1AQ9UBC5 1043 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 MYO6Q9UM54 1294 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 FRMD4BQ9Y2L6 1034 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 WNT6Q9Y6F9 365 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 MYO16Q9Y6X6 1858 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 RALGAPA1Q6GYQ0 2036 aa9.97□□□□□ -0.81
TMEM39A-208ENST00000486159 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 USP27XA6NNY8 438 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 AXIN1O15169 862 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 RNF40O75150 1001 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 NOL4O94818 638 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 IPO7O95373 1038 aaKnown RBP9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 FGF19O95750 216 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 AFPP02771 609 aaKnown RBP9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 TMEM191BP0C7N4 346 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 PAX3P23760 479 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 GJA4P35212 333 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 AVPR1AP37288 418 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 CASP4P49662 377 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 NRLP54845 237 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 MCCD1P59942 119 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 RBP5P82980 135 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 TUBB2AQ13885 445 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 LRRC32Q14392 662 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 TMEM196Q5HYL7 178 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 DGKKQ5KSL6 1271 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 FAM171BQ6P995 826 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 LIMS2Q7Z4I7 341 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 KBTBD6Q86V97 674 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 MON1AQ86VX9 555 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 LONP2Q86WA8 852 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 NT5DC4Q86YG4 428 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 FAM160A2Q8N612 972 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 LRRC52Q8N7C0 313 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 PLEKHO2Q8TD55 490 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 MYLPFQ96A32 169 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 HPDLQ96IR7 371 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 GCNAQ96QF7 691 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 SYT15Q9BQS2 421 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 TUBB2BQ9BVA1 445 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 FAM126AQ9BYI3 521 aaPredicted RBP9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 PLCB1Q9NQ66 1216 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 SEMA4GQ9NTN9 838 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 HSPBP1Q9NZL4 362 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 GCNT4Q9P109 453 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 GMEB2Q9UKD1 530 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 INVSQ9Y283 1065 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 MAST4O15021 2626 aa9.96□□□□□ -0.82
TMEM39A-208ENST00000486159 PTPRDP23468 1912 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 SOWAHDA6NJG2 315 aa9.95□□□□□ -0.82
TMEM39A-208ENST00000486159 CLDN5O00501 218 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms