RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 BBS7Q8IWZ6 715 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 PHTF2Q8N3S3 785 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 NAT16Q8N8M0 369 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 SLC2A14Q8TDB8 520 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 RLN3Q8WXF3 142 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 EDEM2Q9BV94 578 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 LSM14BQ9BX40 385 aaKnown RBP20.38■□□□□ 0.85
COL27A1-205ENST00000485397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL27A1-205ENST00000485397 FAM92AA1XBS5 289 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 PDXKO00764 312 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 IRF1P10914 325 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 GAD2Q05329 585 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 C1orf220Q5T0J3 134 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 CEP135Q66GS9 1140 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 SV2AQ7L0J3 742 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 C11orf74Q86VG3 221 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 CRYBG2Q8N1P7 616 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 C12orf29Q8N999 325 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 OLIG1Q8TAK6 271 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 TMEM174Q8WUU8 243 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 OTUB2Q96DC9 234 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 CHAMP1Q96JM3 812 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 FAM49BQ9NUQ9 324 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 COMMD8Q9NX08 183 aa20.37■□□□□ 0.85
COL27A1-205ENST00000485397 EPG5Q9HCE0 2579 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 C4orf47A7E2U8 309 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.36■□□□□ 0.85
COL27A1-205ENST00000485397 ADAM23O75077 832 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 ALDH1A2O94788 518 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 KCNK5O95279 499 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 RPN1P04843 607 aaKnown RBP20.36■□□□□ 0.85
COL27A1-205ENST00000485397 P4HA1P13674 534 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 PFKFB1P16118 471 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 PMLP29590 882 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 TNFRSF4P43489 277 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 DHPSP49366 369 aaPredicted RBP20.36■□□□□ 0.85
COL27A1-205ENST00000485397 TUBP50607 506 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 MAP3K7CLP57077 242 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 EOGTQ5NDL2 527 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 TMEM25Q86YD3 366 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 ETFBKMTQ8IXQ9 262 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 FRMD1Q8N878 549 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 TMC2Q8TDI7 906 aa20.36■□□□□ 0.85
COL27A1-205ENST00000485397 CIZ1Q9ULV3 898 aaPredicted RBP20.36■□□□□ 0.85
COL27A1-205ENST00000485397 TBC1D3BA6NDS4 549 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 PATE3B3GLJ2 98 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 TULP3O75386 442 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 TBX18O95935 607 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 ASS1P00966 412 aaKnown RBP20.35■□□□□ 0.85
COL27A1-205ENST00000485397 HLA-DRAP01903 254 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 ADORA2BP29275 332 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 ASPAP45381 313 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 ANO4Q32M45 955 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 HSF5Q4G112 596 aaPredicted RBP20.35■□□□□ 0.85
COL27A1-205ENST00000485397 CYP2U1Q7Z449 544 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 UNC93AQ86WB7 457 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 TAF4BQ92750 862 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 TWNKQ96RR1 684 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 NACA2Q9H009 215 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 CSNK1G1Q9HCP0 422 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 POLMQ9NP87 494 aaPredicted RBP20.35■□□□□ 0.85
COL27A1-205ENST00000485397 SPHK2Q9NRA0 654 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 THADAQ6YHU6 1953 aa20.35■□□□□ 0.85
COL27A1-205ENST00000485397 LNP1A1A4G5 178 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 KHNYNO15037 678 aaKnown RBP20.34■□□□□ 0.85
COL27A1-205ENST00000485397 TRIM24O15164 1050 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 HOXC11O43248 304 aaPredicted RBP20.34■□□□□ 0.85
COL27A1-205ENST00000485397 TLR5O60602 858 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 CMA1P23946 247 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 P2RY2P41231 377 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 PIK3CAP42336 1068 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 BTBD8Q5XKL5 378 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 GPRIN1Q7Z2K8 1008 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 WHAMMQ8TF30 809 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 HMGB4Q8WW32 186 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 PIGKQ92643 395 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 JAKMIP2Q96AA8 810 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 BCCIPQ9P287 314 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL27A1-205ENST00000485397 ANGPTL2Q9UKU9 493 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 HPSEQ9Y251 543 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 FRMD4BQ9Y2L6 1034 aa20.34■□□□□ 0.85
COL27A1-205ENST00000485397 NUP205Q92621 2012 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 TCRBV21S2A2A0A5A6 115 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 IKBKBO14920 756 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 CALUO43852 315 aaPredicted RBP20.33■□□□□ 0.85
COL27A1-205ENST00000485397 GREM1O60565 184 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 PRR29P0C7W0 189 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 FAM200BP0CF97 657 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 ST3GAL2Q16842 350 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 PSAPL1Q6NUJ1 521 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 ARMCX6Q7L4S7 300 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 PGBD3Q8N328 593 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 DUSP9Q99956 384 aaKnown RBP20.33■□□□□ 0.85
COL27A1-205ENST00000485397 KLF16Q9BXK1 252 aaPredicted RBP20.33■□□□□ 0.85
COL27A1-205ENST00000485397 FBXO44Q9H4M3 255 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 APOBEC3GQ9HC16 384 aaKnown RBP20.33■□□□□ 0.85
COL27A1-205ENST00000485397 TLR8Q9NR97 1041 aaKnown RBP20.33■□□□□ 0.85
COL27A1-205ENST00000485397 OSER1Q9NX31 292 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 DEC1Q9P2X7 70 aa20.33■□□□□ 0.85
COL27A1-205ENST00000485397 USP25Q9UHP3 1055 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms