RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 PUM1Q14671 1186 aaKnown RBP eCLIP16.78■□□□□ 0.28
SIK3-211ENST00000485363 GAB4Q2WGN9 574 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
SIK3-211ENST00000485363 TCERG1LQ5VWI1 586 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 ANKRD40Q6AI12 368 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 RHBDF2Q6PJF5 856 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 WHAMMQ8TF30 809 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 GAB3Q8WWW8 586 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 SEMA4DQ92854 862 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 PARD6AQ9NPB6 346 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 SCML2Q9UQR0 700 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 SPAG17Q6Q759 2223 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 PRR5-ARHGAP8B1AHC4 643 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 HHLA1C9JL84 531 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 RPP40O75818 363 aaKnown RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 CCDC192P0DO97 292 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 ADH5P11766 374 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 ACO1P21399 889 aaKnown RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 TGM1P22735 817 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 EIF2DP41214 584 aaKnown RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 SEC13P55735 322 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 ARHGAP8P85298 464 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 LRRC63Q05C16 580 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 STIM1Q13586 685 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 DMC1Q14565 340 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 ZNF394Q53GI3 561 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 GPRIN1Q7Z2K8 1008 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 ZC3H3Q8IXZ2 948 aaKnown RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 ERCC4Q92889 916 aaPredicted RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 HHIPQ96QV1 700 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 PNKPQ96T60 521 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 DUSP9Q99956 384 aaKnown RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 FAM124BQ9H5Z6 455 aaPredicted RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 POLR3BQ9NW08 1133 aaPredicted RBP16.77■□□□□ 0.28
SIK3-211ENST00000485363 DLL3Q9NYJ7 618 aa16.77■□□□□ 0.28
SIK3-211ENST00000485363 EML5Q05BV3 1969 aa16.77■□□□□ 0.27
SIK3-211ENST00000485363 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 K7EQS6 105 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 AXIN1O15169 862 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 APBB3O95704 486 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 ATP5C1P36542 298 aaKnown RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 SLC6A11P48066 632 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 PMS1P54277 932 aaKnown RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 GAD2Q05329 585 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 RSPO4Q2I0M5 234 aaPredicted RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 PPP1R26Q5T8A7 1209 aaPredicted RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 DGLUCYQ7Z3D6 616 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 CACNA2D4Q7Z3S7 1137 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 ELOA2Q8IYF1 753 aaPredicted RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 FAM160A2Q8N612 972 aaPredicted RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 USP33Q8TEY7 942 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 HEXIM2Q96MH2 286 aaKnown RBP16.76■□□□□ 0.27
SIK3-211ENST00000485363 DUSP16Q9BY84 665 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 CISHQ9NSE2 258 aa16.76■□□□□ 0.27
SIK3-211ENST00000485363 TRIM49BA6NDI0 452 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 PSMA7O14818 248 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 CYP26A1O43174 497 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 APODP05090 189 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 IRF1P10914 325 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 PPP1R2P41236 205 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 PGFP49763 221 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 GOLGA8FQ08AF8 430 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 GOLGA8DPQ0D2H9 430 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 CBWD6Q4V339 395 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 C2orf27AQ580R0 203 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 CBWD3Q5JTY5 395 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 CBWD5Q5RIA9 395 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 LY6G5CQ5SRR4 150 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 BTBD8Q5XKL5 378 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 BBS7Q8IWZ6 715 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 ARHGEF4Q9NR80 690 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 SEMA4GQ9NTN9 838 aa16.75■□□□□ 0.27
SIK3-211ENST00000485363 ARMCX3Q9UH62 379 aaPredicted RBP16.75■□□□□ 0.27
SIK3-211ENST00000485363 KAT7O95251 611 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 TBX18O95935 607 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 PSEN1P49768 467 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 KIF11P52732 1056 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 MRPS21P82921 87 aaKnown RBP16.74■□□□□ 0.27
SIK3-211ENST00000485363 CSRP2Q16527 193 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 PREPLQ4J6C6 727 aaPredicted RBP16.74■□□□□ 0.27
SIK3-211ENST00000485363 HTR3DQ70Z44 454 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 TADA2BQ86TJ2 420 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 C12orf40Q86WS4 652 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 SLC4A11Q8NBS3 891 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 TSTD1Q8NFU3 115 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 TATDN2Q93075 761 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 DHTKD1Q96HY7 919 aaPredicted RBP16.74■□□□□ 0.27
SIK3-211ENST00000485363 LOXL4Q96JB6 756 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 ARID3AQ99856 593 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 KLF16Q9BXK1 252 aaPredicted RBP16.74■□□□□ 0.27
SIK3-211ENST00000485363 NMUR1Q9HB89 426 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 SPHK2Q9NRA0 654 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 OSER1Q9NX31 292 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 EBF1Q9UH73 591 aa16.74■□□□□ 0.27
SIK3-211ENST00000485363 LSM7Q9UK45 103 aaKnown RBP16.74■□□□□ 0.27
SIK3-211ENST00000485363 CDV3Q9UKY7 258 aaKnown RBP16.74■□□□□ 0.27
SIK3-211ENST00000485363 MMP17Q9ULZ9 603 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms