RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 DEC1Q9P2X7 70 aa14.57□□□□□ -0.08
NUP188-206ENST00000485158 ATXN2Q99700 1313 aaKnown RBP14.57□□□□□ -0.08
NUP188-206ENST00000485158 A0A087X0B3 334 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 IGHV1OR15-9A0A0B4J2B8 117 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 SCAMP3O14828 347 aaKnown RBP14.56□□□□□ -0.08
NUP188-206ENST00000485158 GREM1O60565 184 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 OPHN1O60890 802 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 ABL1P00519 1130 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 CFIP05156 583 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 NTSR1P30989 418 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 RDXP35241 583 aaKnown RBP14.56□□□□□ -0.08
NUP188-206ENST00000485158 FAM193AP78312 1265 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 RPL6Q02878 288 aaKnown RBP14.56□□□□□ -0.08
NUP188-206ENST00000485158 HECTD3Q5T447 861 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 BTBD8Q5XKL5 378 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 STXBP4Q6ZWJ1 553 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 EPM2AIP1Q7L775 607 aaPredicted RBP14.56□□□□□ -0.08
NUP188-206ENST00000485158 PROSER1Q86XN7 944 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 CCDC65Q8IXS2 484 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 MINDY1Q8N5J2 469 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 B3GALNT2Q8NCR0 500 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 GLIS3Q8NEA6 775 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 OR6B3Q8NGW1 331 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 ZNF419Q96HQ0 510 aaPredicted RBP14.56□□□□□ -0.08
NUP188-206ENST00000485158 GABRG3Q99928 467 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 B3GNT5Q9BYG0 378 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 XYLT2Q9H1B5 865 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 DPEP3Q9H4B8 488 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 VRTNQ9H8Y1 702 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 ZDHHC4Q9NPG8 344 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 COMMD8Q9NX08 183 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 CALCOCO1Q9P1Z2 691 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
NUP188-206ENST00000485158 LHX6Q9UPM6 363 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 CEP192Q8TEP8 1941 aa14.56□□□□□ -0.08
NUP188-206ENST00000485158 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
NUP188-206ENST00000485158 EIF3DO15371 548 aaKnown RBP eCLIP14.55□□□□□ -0.08
NUP188-206ENST00000485158 STAT6P42226 847 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 ATXN3P54252 364 aaPredicted RBP14.55□□□□□ -0.08
NUP188-206ENST00000485158 SNRPFP62306 86 aaKnown RBP14.55□□□□□ -0.08
NUP188-206ENST00000485158 PSMD6Q15008 389 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 SNRNP35Q16560 246 aaKnown RBP14.55□□□□□ -0.08
NUP188-206ENST00000485158 WDR72Q3MJ13 1102 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 CNNM4Q6P4Q7 775 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 TMEM25Q86YD3 366 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 MIB1Q86YT6 1006 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 SLC41A1Q8IVJ1 513 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 BBS7Q8IWZ6 715 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 PGBD3Q8N328 593 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 ZNF507Q8TCN5 953 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 KCNK16Q96T55 309 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 CGRRF1Q99675 332 aa14.55□□□□□ -0.08
NUP188-206ENST00000485158 GZF1Q9H116 711 aaPredicted RBP14.55□□□□□ -0.08
NUP188-206ENST00000485158 SMG1Q96Q15 3661 aaKnown RBP14.55□□□□□ -0.08
NUP188-206ENST00000485158 A8MXQ7 604 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 TGFB1I1O43294 461 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 CACNG3O60359 315 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 SYPP08247 313 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 HOXB2P14652 356 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 ATICP31939 592 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 TNNC1P63316 161 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 C10orf76Q5T2E6 689 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 PAQR9Q6ZVX9 377 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 HTR3DQ70Z44 454 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 CHCHD4Q8N4Q1 142 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 SCAMP5Q8TAC9 235 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 NOC3LQ8WTT2 800 aaKnown RBP14.54□□□□□ -0.08
NUP188-206ENST00000485158 ADAMTS14Q8WXS8 1223 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 FBXO32Q969P5 355 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 GTPBP2Q9BX10 602 aaKnown RBP14.54□□□□□ -0.08
NUP188-206ENST00000485158 TNMDQ9H2S6 317 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 FAM124BQ9H5Z6 455 aaPredicted RBP14.54□□□□□ -0.08
NUP188-206ENST00000485158 CCSER2Q9H7U1 834 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 FSCN3Q9NQT6 498 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 AGPAT3Q9NRZ7 376 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 KBTBD4Q9NVX7 518 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 MARK1Q9P0L2 795 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 CHORDC1Q9UHD1 332 aaPredicted RBP14.54□□□□□ -0.08
NUP188-206ENST00000485158 SH3BP1Q9Y3L3 701 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 NFE2L3Q9Y4A8 694 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 ADAMTS9Q9P2N4 1935 aa14.54□□□□□ -0.08
NUP188-206ENST00000485158 GFRA2O00451 464 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 CLDN5O00501 218 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 TNNI1P19237 187 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 NDUFV2P19404 249 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 PDCP20941 246 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 SLC5A3P53794 718 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 CYP24A1Q07973 514 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 SLC39A14Q15043 492 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 METTL3Q86U44 580 aaKnown RBP14.53□□□□□ -0.08
NUP188-206ENST00000485158 NAT16Q8N8M0 369 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 TRIML1Q8N9V2 468 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 IPO4Q8TEX9 1081 aaKnown RBP14.53□□□□□ -0.08
NUP188-206ENST00000485158 ZNF516Q92618 1163 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 WBP2Q969T9 261 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 SYAP1Q96A49 352 aaPredicted RBP14.53□□□□□ -0.08
NUP188-206ENST00000485158 TRIM9Q9C026 710 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 LRRC27Q9C0I9 530 aa14.53□□□□□ -0.08
NUP188-206ENST00000485158 DMAP1Q9NPF5 467 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms