RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ALDH9A1P49189 494 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 MTHFSP49914 203 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 SIM1P81133 766 aaPredicted RBP7.79□□□□□ -1.16
UBR3-210ENST00000484596 MRPS21P82921 87 aaKnown RBP7.79□□□□□ -1.16
UBR3-210ENST00000484596 ZNF362Q5T0B9 420 aaPredicted RBP7.79□□□□□ -1.16
UBR3-210ENST00000484596 MANEALQ5VSG8 457 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 CRTC1Q6UUV9 634 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 KIAA0408Q6ZU52 694 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 TMEM171Q8WVE6 324 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 MUL1Q969V5 352 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 RSPRY1Q96DX4 576 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 PBKQ96KB5 322 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBR3-210ENST00000484596 TLK1Q9UKI8 766 aa7.79□□□□□ -1.16
UBR3-210ENST00000484596 SPATA31A6Q5VVP1 1343 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 COL11A2P13942 1736 aaPredicted RBP7.78□□□□□ -1.16
UBR3-210ENST00000484596 NBNO60934 754 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 SKAP2O75563 359 aaPredicted RBP7.78□□□□□ -1.16
UBR3-210ENST00000484596 EGR1P18146 543 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 SLC5A2P31639 672 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 GATMP50440 423 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 PGDP52209 483 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 KCNAB1Q14722 419 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 PDCD2Q16342 344 aaPredicted RBP7.78□□□□□ -1.16
UBR3-210ENST00000484596 MAPKAPK3Q16644 382 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.78□□□□□ -1.16
UBR3-210ENST00000484596 KAZNQ674X7 775 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 SYCE2Q6PIF2 218 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 TMED8Q6PL24 325 aaPredicted RBP7.78□□□□□ -1.16
UBR3-210ENST00000484596 GLIS1Q8NBF1 620 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 C17orf80Q9BSJ5 609 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 SLC25A32Q9H2D1 315 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 TRIM36Q9NQ86 728 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 LRIT1Q9P2V4 623 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 ZMYND8Q9ULU4 1186 aaPredicted RBP7.78□□□□□ -1.16
UBR3-210ENST00000484596 CA14Q9ULX7 337 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 SNX14Q9Y5W7 946 aa7.78□□□□□ -1.16
UBR3-210ENST00000484596 A1L4Q6 167 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 WDR27A2RRH5 827 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 PSMD9O00233 223 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 NPHP1O15259 732 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 CHRM2P08172 466 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 CD19P15391 556 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 LIPAP38571 399 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 RARRES1P49788 294 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 C21orf58P58505 322 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 MRPS35P82673 323 aaKnown RBP7.77□□□□□ -1.17
UBR3-210ENST00000484596 TIAL1Q01085 375 aaKnown RBP eCLIP7.77□□□□□ -1.17
UBR3-210ENST00000484596 EIF2B5Q13144 721 aaKnown RBP7.77□□□□□ -1.17
UBR3-210ENST00000484596 RAB30Q15771 203 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 SLC5A9Q2M3M2 681 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 BOLLQ8N9W6 283 aaKnown RBP7.77□□□□□ -1.17
UBR3-210ENST00000484596 SOCS4Q8WXH5 440 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 GLG1Q92896 1179 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 HIST1H2AAQ96QV6 131 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 DUSP26Q9BV47 211 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 VN1R3Q9BXE9 311 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.77□□□□□ -1.17
UBR3-210ENST00000484596 PCDHAC1Q9H158 963 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 FOXJ2Q9P0K8 574 aa7.77□□□□□ -1.17
UBR3-210ENST00000484596 MGST3O14880 152 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 RHOP08100 348 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 PDHA1P08559 390 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 ZFXP17010 805 aaPredicted RBP7.76□□□□□ -1.17
UBR3-210ENST00000484596 RALBP1Q15311 655 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 PUM3Q15397 648 aaKnown RBP7.76□□□□□ -1.17
UBR3-210ENST00000484596 TXNRD1Q16881 649 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 CCDC28AQ8IWP9 274 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 ABHD5Q8WTS1 349 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 PDLIM2Q96JY6 352 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 TMEM8AQ9HCN3 771 aa7.76□□□□□ -1.17
UBR3-210ENST00000484596 DRG1Q9Y295 367 aaKnown RBP7.76□□□□□ -1.17
UBR3-210ENST00000484596 ZCCHC6Q5VYS8 1495 aaKnown RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 hCG_1642624A0A1W2PR95 340 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 PIP5K1CO60331 668 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 PRKCBP05771 671 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 DLDP09622 509 aaKnown RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 CD38P28907 300 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 PPM1FP49593 454 aaPredicted RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 ELLP55199 621 aaPredicted RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 TIRAPP58753 221 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 SP2Q02086 613 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 NSUN2Q08J23 767 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBR3-210ENST00000484596 TRIM14Q14142 442 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 TREML2Q5T2D2 321 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 SLC9A4Q6AI14 798 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 ZNF551Q7Z340 670 aaPredicted RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 MAVSQ7Z434 540 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 WDR53Q7Z5U6 358 aaPredicted RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 SMAP1Q8IYB5 467 aaPredicted RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 CPXCR1Q8N123 301 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 MBD3L2Q8NHZ7 208 aaPredicted RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 ACTRT2Q8TDY3 377 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 PNISRQ8TF01 805 aaKnown RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 TFAP2BQ92481 460 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 RFKQ969G6 155 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 DPCDQ9BVM2 203 aaPredicted RBP7.75□□□□□ -1.17
UBR3-210ENST00000484596 PRDM16Q9HAZ2 1276 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 TNFRSF18Q9Y5U5 241 aa7.75□□□□□ -1.17
UBR3-210ENST00000484596 MORC2Q9Y6X9 1032 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms