RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 GAR1Q9NY12 217 aaKnown RBP5.34□□□□□ -1.55
SCAF11-207ENST00000484275 CPNE7Q9UBL6 633 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 ASAP1Q9ULH1 1129 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 NOP58Q9Y2X3 529 aaKnown RBP5.34□□□□□ -1.55
SCAF11-207ENST00000484275 ZMYM2Q9UBW7 1377 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 RNF8O76064 485 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 HGFP14210 728 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 MCM5P33992 734 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 DEUP1Q05D60 604 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 NPY5RQ15761 445 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 C4orf46Q504U0 113 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 MAEAQ7L5Y9 396 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 ZNF548Q8NEK5 533 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-207ENST00000484275 ADAMTS15Q8TE58 950 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 SPSB4Q96A44 273 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 KAZALD1Q96I82 304 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 PPP1R9BQ96SB3 815 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 BRIP1Q9BX63 1249 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 ADGRE3Q9BY15 652 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 C22orf23Q9BZE7 217 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 SNX15Q9NRS6 342 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 MGAT4CQ9UBM8 478 aa5.33□□□□□ -1.56
SCAF11-207ENST00000484275 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 TRIM43BA6NCK2 446 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 FAM90A10PA6NDY2 464 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 CD8B2A6NJW9 211 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 PYCARD-AS1I3L0S3 204 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 EXOC5O00471 708 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 RRP9O43818 475 aaKnown RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 CNOT3O75175 753 aaKnown RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 CTSAP10619 480 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 PTDSS1P48651 473 aaKnown RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 ITGA8P53708 1063 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 SUMO3P55854 103 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 NANOS2P60321 138 aaKnown RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 YPEL5P62699 121 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 KCNB1Q14721 858 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 CHPFQ8IZ52 775 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 METTL25Q8N6Q8 603 aa5.32□□□□□ -1.56
SCAF11-207ENST00000484275 TRIM43Q96BQ3 446 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 EDC3Q96F86 508 aaKnown RBP5.32□□□□□ -1.56
SCAF11-207ENST00000484275 LOC102723971A0A1B0GUV8 181 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 MBD3L4A6NDZ8 208 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-207ENST00000484275 MBD3L3A6NE82 208 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-207ENST00000484275 RGS10O43665 173 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 TMPRSS11DO60235 418 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 ALPLP05186 524 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 ID2Q02363 134 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 CFHR3Q02985 330 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 SLC14A1Q13336 389 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 INSCQ1MX18 579 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 APOA5Q6Q788 366 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 MEPCEQ7L2J0 689 aaKnown RBP5.31□□□□□ -1.56
SCAF11-207ENST00000484275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCAF11-207ENST00000484275 WIPF2Q8TF74 440 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-207ENST00000484275 MARK4Q96L34 752 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 HS6ST2Q96MM7 605 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 CAMK1GQ96NX5 476 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 CDH19Q9H159 772 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 SACM1LQ9NTJ5 587 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 PI4KBQ9UBF8 816 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 RIMKLBQ9ULI2 386 aa5.31□□□□□ -1.56
SCAF11-207ENST00000484275 E2F8A0AVK6 867 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 CLIC1O00299 241 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 CCP110O43303 1012 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 TOMM40O96008 361 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 PARP1P09874 1014 aaKnown RBP5.3□□□□□ -1.56
SCAF11-207ENST00000484275 CBSLP0DN79 551 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 PSG1P11464 419 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 SCP2P22307 547 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 CBSP35520 551 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 MTHFSP49914 203 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 GATMP50440 423 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 MFSD13AQ14CX5 517 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 ZNF750Q32MQ0 723 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 MIDNQ504T8 468 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 C3orf38Q5JPI3 329 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 C9orf47Q6ZRZ4 202 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 KIAA0319LQ8IZA0 1049 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 RUNDC1Q96C34 613 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 TMEM60Q9H2L4 133 aa5.3□□□□□ -1.56
SCAF11-207ENST00000484275 TYW1Q9NV66 732 aaKnown RBP5.3□□□□□ -1.56
SCAF11-207ENST00000484275 CAPN8A6NHC0 703 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 RFPL1O75677 317 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 KLRC1P26715 233 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 THBS3P49746 956 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 PGDP52209 483 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 DENND2CQ68D51 928 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 VSTM1Q6UX27 236 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 USP49Q70CQ1 688 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 ANKRD13BQ86YJ7 626 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 C12orf76Q8N812 135 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-207ENST00000484275 C11orf44Q8N8P7 122 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 SUCLG2Q96I99 432 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 STK31Q9BXU1 1019 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 TRIM36Q9NQ86 728 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 POT1Q9NUX5 634 aa5.29□□□□□ -1.56
SCAF11-207ENST00000484275 DDX56Q9NY93 547 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms