RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 SOX13Q9UN79 622 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 HMX2A2RU54 273 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 ARHGAP42A6NI28 874 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 APOC4-APOC2K7ER74 178 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 DGAT1O75907 488 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 APOC2P02655 101 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 YWHAZP63104 245 aaKnown RBP20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 TAP1Q03518 808 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 MMRN1Q13201 1228 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 TUBB3Q13509 450 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 PTPN20Q4JDL3 420 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 DENND1BQ6P3S1 775 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 MCF2L2Q86YR7 1114 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 THNSL1Q8IYQ7 743 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 ZNF778Q96MU6 729 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 RMDN3Q96TC7 470 aa20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 TARS2Q9BW92 718 aaKnown RBP20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
RPUSD3-216ENST00000484134 KRT7P08729 469 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 PIM1P11309 404 aaPredicted RBP20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 KRT3P12035 628 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 PEX2P28328 305 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 SP4Q02446 784 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 GHRHRQ02643 423 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 ASPHQ12797 758 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 EFHC1Q5JVL4 640 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 AAGABQ6PD74 315 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 SATL1Q86VE3 508 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 TRIM42Q8IWZ5 723 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 KCTD6Q8NC69 237 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 MCPH1Q8NEM0 835 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 CISHQ9NSE2 258 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 ZNF219Q9P2Y4 722 aaPredicted RBP20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 SEPT9Q9UHD8 586 aaPredicted RBP20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 STAM2O75886 525 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 KRT37O76014 449 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 UQCRBP14927 111 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 VCLP18206 1134 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 AOC1P19801 751 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 DGKZQ13574 1117 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 GRM2Q14416 872 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 HIC1Q14526 733 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 HSPH1Q92598 858 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 TMEM143Q96AN5 459 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 DTNBP1Q96EV8 351 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 MSTO1Q9BUK6 570 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 CYP26B1Q9NR63 512 aa20.52■□□□□ 0.88
RPUSD3-216ENST00000484134 MCF2LO15068 1137 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 PDE5AO76074 875 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 ASS1P00966 412 aaKnown RBP20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 BPGMP07738 259 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 MED21Q13503 144 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 DARS2Q6PI48 645 aaKnown RBP20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 SLC26A7Q8TE54 656 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 FAF2Q96CS3 445 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 OLFM3Q96PB7 478 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 POPDC2Q9HBU9 364 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 FBXO40Q9UH90 709 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 ARID2Q68CP9 1835 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 CSH1P0DML2 217 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 CSH2P0DML3 217 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 CDH5P33151 784 aaPredicted RBP20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 HIRAP54198 1017 aaPredicted RBP20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 MYL6P60660 151 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 IRX4P78413 519 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 FAXCQ5TGI0 409 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 DENND5BQ6ZUT9 1274 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 APOL6Q9BWW8 343 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 CALN1Q9BXU9 219 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 IMPG2Q9BZV3 1241 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 ETNK2Q9NVF9 386 aa20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 COL2A1P02458 1487 aaPredicted RBP20.51■□□□□ 0.87
RPUSD3-216ENST00000484134 ITM2AO43736 263 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 SPAG6O75602 509 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 LYPLA1O75608 230 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 ATG7O95352 703 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 EPHB1P54762 984 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 CDK18Q07002 472 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 WASHC5Q12768 1159 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 TBCCQ15814 346 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 CCDC60Q8IWA6 550 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 EFCAB3Q8N7B9 438 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 CMASQ8NFW8 434 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 GDPD5Q8WTR4 605 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 TMX4Q9H1E5 349 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 LMCD1Q9NZU5 365 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 ZC3H7BQ9UGR2 993 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 ZNF180Q9UJW8 692 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 STK10O94804 968 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 GSRP00390 522 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 EIF4BP23588 611 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 INHBCP55103 352 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 HADHQ16836 314 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 RABGAP1LQ5R372 815 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 CAND1Q86VP6 1230 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 ADGRF2Q8IZF7 708 aa20.5■□□□□ 0.87
RPUSD3-216ENST00000484134 NDUFAF2Q8N183 169 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms