RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ATP2C2O75185 946 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ABLIM3O94929 683 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 VNN1O95497 513 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 FTCDO95954 541 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ASS1P00966 412 aaKnown RBP7.31□□□□□ -1.24
BRCA1-216ENST00000484087 CST3P01034 146 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-216ENST00000484087 MMEP08473 750 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 MYBL1P10243 752 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ODC1P11926 461 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 GNA15P30679 374 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ATICP31939 592 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 RAP1GAPP47736 663 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 CREMQ03060 361 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 DUSP4Q13115 394 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ORC1Q13415 861 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 BRD3Q15059 726 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF699Q32M78 642 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ACAD10Q6JQN1 1059 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 TMEM270Q6UE05 265 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 SCARA5Q6ZMJ2 495 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF461Q8TAF7 563 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 SLC35G2Q8TBE7 412 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 FGF14Q92915 247 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ZFRQ96KR1 1074 aaKnown RBP7.31□□□□□ -1.24
BRCA1-216ENST00000484087 NECTIN4Q96NY8 510 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 SEPT5Q99719 369 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-216ENST00000484087 CORO1BQ9BR76 489 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 TLR10Q9BXR5 811 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 NIF3L1Q9GZT8 377 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 THAP2Q9H0W7 228 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 PLEKHA4Q9H4M7 779 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ZDHHC7Q9NXF8 308 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 UVRAGQ9P2Y5 699 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 DERAQ9Y315 318 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 CEP83Q9Y592 693 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 SNX9Q9Y5X1 595 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 GREB1Q4ZG55 1949 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF318Q5VUA4 2279 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 COL4A2P08572 1712 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 MYO16Q9Y6X6 1858 aa7.31□□□□□ -1.24
BRCA1-216ENST00000484087 CCDC151A5D8V7 595 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 H7C4K7 107 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 KCNK3O14649 394 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF185O15231 689 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 RRP9O43818 475 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 LRG1P02750 347 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 RHOP08100 348 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CFHP08603 1231 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 RHOXF2BP0C7M4 288 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MYL4P12829 197 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ATF2P15336 505 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ATF6P18850 670 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 FSHRP23945 695 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 LMO2P25791 158 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 NSFP46459 744 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 DNA2P51530 1060 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 VCPP55072 806 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 HADHBP55084 474 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MYL6P60660 151 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZXDAP98168 799 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 FMO1Q01740 532 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 KCNC4Q03721 635 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TCEAL1Q15170 157 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 SV2CQ496J9 727 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MAP9Q49MG5 647 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 PABPC1LQ4VXU2 614 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF667Q5HYK9 610 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TMEM31Q5JXX7 168 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 SPOPLQ6IQ16 392 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 FBXO38Q6PIJ6 1188 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 PARM1Q6UWI2 310 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF572Q7Z3I7 529 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CREG2Q8IUH2 290 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 NPAS3Q8IXF0 933 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 TTC39CQ8N584 583 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 UBL4BQ8N7F7 174 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 LRRC57Q8N9N7 239 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 RBBP8NLQ8NC74 664 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 APPL2Q8NEU8 664 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 CMASQ8NFW8 434 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 GIPC2Q8TF65 315 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 KBTBD7Q8WVZ9 684 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 FGF13Q92913 245 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF653Q96CK0 615 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MCRS1Q96EZ8 462 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF560Q96MR9 790 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MMS19Q96T76 1030 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 PSMB7Q99436 277 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 NAP1L3Q99457 506 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 KXD1Q9BQD3 176 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 RHOXF2Q9BQY4 288 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 MRPL45Q9BRJ2 306 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 PARD6BQ9BYG5 372 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 DNAI2Q9GZS0 605 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 DPEP3Q9H4B8 488 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 KCNK12Q9HB15 430 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 APOBEC3GQ9HC16 384 aaKnown RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF334Q9HCZ1 680 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ARFGAP3Q9NP61 516 aa7.3□□□□□ -1.24
BRCA1-216ENST00000484087 ABI2Q9NYB9 513 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms