RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ELMO3Q96BJ8 720 aa13.71□□□□□ -0.21
UBR4-213ENST00000483922 ZNF419Q96HQ0 510 aaPredicted RBP13.71□□□□□ -0.21
UBR4-213ENST00000483922 BBC3Q96PG8 261 aaPredicted RBP13.71□□□□□ -0.21
UBR4-213ENST00000483922 MMS19Q96T76 1030 aa13.71□□□□□ -0.21
UBR4-213ENST00000483922 PANK2Q9BZ23 570 aa13.71□□□□□ -0.21
UBR4-213ENST00000483922 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.21
UBR4-213ENST00000483922 WASH3PC4AMC7 463 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 H0Y626 953 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 HOXC11O43248 304 aaPredicted RBP13.7□□□□□ -0.22
UBR4-213ENST00000483922 AP5Z1O43299 807 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 OPHN1O60890 802 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 TRIM16O95361 564 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 ZDHHC11BP0C7U3 371 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 TRIP6Q15654 476 aaKnown RBP13.7□□□□□ -0.22
UBR4-213ENST00000483922 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
UBR4-213ENST00000483922 SNX30Q5VWJ9 437 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 RRAGBQ5VZM2 374 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 LARP1BQ659C4 914 aaKnown RBP13.7□□□□□ -0.22
UBR4-213ENST00000483922 FAM173BQ6P4H8 233 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 TOGARAM2Q6ZUX3 1019 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 NUP93Q8N1F7 819 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 HDDC3Q8N4P3 179 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 TRIML1Q8N9V2 468 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 TERB1Q8NA31 727 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 KCNV2Q8TDN2 545 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 ADAMTS14Q8WXS8 1223 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 ANKRD36BP1Q96IX9 119 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 SPHK2Q9NRA0 654 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 PPP4R2Q9NY27 417 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 STK17AQ9UEE5 414 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 CYP8B1Q9UNU6 501 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 SRPRBQ9Y5M8 271 aaKnown RBP13.7□□□□□ -0.22
UBR4-213ENST00000483922 RAD54BQ9Y620 910 aa13.7□□□□□ -0.22
UBR4-213ENST00000483922 ZNF233A6NK53 670 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 TGFB1I1O43294 461 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 CBFA2T3O75081 653 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 BEST1O76090 585 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 CISD3P0C7P0 127 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 FTH1P19P0C7X4 201 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 HOXB2P14652 356 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 IDEP14735 1019 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 YWHAQP27348 245 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 NTSR1P30989 418 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
UBR4-213ENST00000483922 CDH8P55286 799 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 BNC1Q01954 994 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 BYSLQ13895 437 aaKnown RBP13.69□□□□□ -0.22
UBR4-213ENST00000483922 COL28A1Q2UY09 1125 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 SLC36A4Q6YBV0 504 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
UBR4-213ENST00000483922 MARCH9Q86YJ5 346 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 RDH13Q8NBN7 331 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 ZMIZ2Q8NF64 920 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 OR6B3Q8NGW1 331 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
UBR4-213ENST00000483922 HSPA12BQ96MM6 686 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 XYLT2Q9H1B5 865 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 IL21RQ9HBE5 538 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 PANK4Q9NVE7 773 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 HSPBP1Q9NZL4 362 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 TBC1D14Q9P2M4 693 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 DEC1Q9P2X7 70 aa13.69□□□□□ -0.22
UBR4-213ENST00000483922 A0A1W2PQD8 194 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 FAM92AA1XBS5 289 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.68□□□□□ -0.22
UBR4-213ENST00000483922 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
UBR4-213ENST00000483922 TBX18O95935 607 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 BMP15O95972 392 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 DPP6P42658 865 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 ZNF423Q2M1K9 1284 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 WDR72Q3MJ13 1102 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 PDZD3Q86UT5 571 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 WDR49Q8IV35 697 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 MDM1Q8TC05 714 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 PLEKHO2Q8TD55 490 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 MRGPRX1Q96LB2 322 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 SLITRK1Q96PX8 696 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 GABRG3Q99928 467 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 DUSP9Q99956 384 aaKnown RBP13.68□□□□□ -0.22
UBR4-213ENST00000483922 SDCBP2Q9H190 292 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 SNX25Q9H3E2 840 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 GMIPQ9P107 970 aa13.68□□□□□ -0.22
UBR4-213ENST00000483922 TNNC2P02585 160 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 FAM163BP0C2L3 166 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 IRF1P10914 325 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 MYL6P60660 151 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 ANO4Q32M45 955 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 HECTD3Q5T447 861 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 HTR3DQ70Z44 454 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 EPM2AIP1Q7L775 607 aaPredicted RBP13.67□□□□□ -0.22
UBR4-213ENST00000483922 DDX42Q86XP3 938 aaKnown RBP eCLIP13.67□□□□□ -0.22
UBR4-213ENST00000483922 B3GALNT2Q8NCR0 500 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 FBXO32Q969P5 355 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 OTUB2Q96DC9 234 aa13.67□□□□□ -0.22
UBR4-213ENST00000483922 KLF16Q9BXK1 252 aaPredicted RBP13.67□□□□□ -0.22
UBR4-213ENST00000483922 ELOVL4Q9GZR5 314 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms