RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ITGA3P26006 1051 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 CDK7P50613 346 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 MSLNQ13421 630 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-207ENST00000483888 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 FBXW8Q8N3Y1 598 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 FBXO25Q8TCJ0 367 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 DCLK3Q9C098 648 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 GDF3Q9NR23 364 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 EDARQ9UNE0 448 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 PVALEFA0A1B0GWK0 134 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 DDB1Q16531 1140 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 SEMA4AQ9H3S1 761 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 RIBC2Q9H4K1 309 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 EHD1Q9H4M9 534 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 KLHL1Q9NR64 748 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 ATP10DQ9P241 1426 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 ALG6Q9Y672 507 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 SIN3BO75182 1162 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 LYNP07948 512 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 EIF2S3P41091 472 aaKnown RBP10.56□□□□□ -0.72
COL12A1-207ENST00000483888 LIFRP42702 1097 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 GALNTL6Q49A17 601 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 KCNK18Q7Z418 384 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 SNX31Q8N9S9 440 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 TFCP2L1Q9NZI6 479 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 HAT1O14929 419 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 GABBR2O75899 941 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 STAT5AP42229 794 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 STAT5BP51692 787 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 XIAPP98170 497 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 TCP10Q12799 353 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 EPC2Q52LR7 807 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 SH3TC2Q8TF17 1288 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 PAFAH2Q99487 392 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 DHX35Q9H5Z1 703 aaKnown RBP10.56□□□□□ -0.72
COL12A1-207ENST00000483888 TMEM138Q9NPI0 162 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 PTPRKQ15262 1439 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 POTEMA6NI47 508 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 CYP26A1O43174 497 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 SNAP91O60641 907 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 UCHL3P15374 230 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 TBXAS1P24557 533 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-207ENST00000483888 RTP1P59025 263 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 UBE3CQ15386 1083 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 TMEM53Q6P2H8 277 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 THEMISQ8N1K5 641 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-207ENST00000483888 OXER1Q8TDS5 423 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 FAM172AQ8WUF8 416 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 KAT2BQ92831 832 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 VPS33AQ96AX1 596 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 RAPGEFL1Q9UHV5 662 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 NPHP3-ACAD11A0A0J9YXS1 232 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 FYNP06241 537 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 TXNRD1Q16881 649 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 IQSEC1Q6DN90 963 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 KBTBD8Q8NFY9 601 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 ART5Q96L15 291 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 RNF145Q96MT1 663 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 SLC8A2Q9UPR5 921 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 MYL12AP19105 171 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 TTI2Q6NXR4 508 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 MZT2AQ6P582 158 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 CRTC3Q6UUV7 619 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 EYA1Q99502 592 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
COL12A1-207ENST00000483888 EMSYQ7Z589 1322 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 GP5P40197 560 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SLC5A3P53794 718 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 DEFA5Q01523 94 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 XXYLT1Q8NBI6 393 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 MCFD2Q8NI22 146 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 CPA5Q8WXQ8 436 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ZFP42Q96MM3 310 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 THAP1Q9NVV9 213 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SNX7Q9UNH6 387 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PLEKHA8P1O95397 391 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ITGA2BP08514 1039 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PKNOX1P55347 436 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 STX4Q12846 297 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 QPCTQ16769 361 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF790Q6PG37 636 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 TXNDC11Q6PKC3 985 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ULK2Q8IYT8 1036 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SLC39A10Q9ULF5 831 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 RALAP11233 206 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ADORA1P30542 326 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 GRM1Q13255 1194 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PID1Q7Z2X4 250 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 TCP10LQ8TDR4 215 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SLC39A3Q9BRY0 314 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 EMILIN2Q9BXX0 1053 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 WDR11Q9BZH6 1224 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PAK5Q9P286 719 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 TUBE1Q9UJT0 475 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF568Q3ZCX4 644 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PAGE2BQ5JRK9 111 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 CDC73Q6P1J9 531 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms