RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RBP3P10745 1247 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 PORP16435 677 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 ZNF24P17028 368 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 ITGAXP20702 1163 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 SHMT1P34896 483 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 RPL22P35268 128 aaKnown RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 PRELPP51888 382 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 RPL7AP62424 266 aaKnown RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 DYNLT1P63172 113 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 C6orf52Q5T4I8 152 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 LIN9Q5TKA1 542 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 BORAQ6PGQ7 559 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 PCGF5Q86SE9 256 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 PATL1Q86TB9 770 aaKnown RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 PQLC1Q8N2U9 271 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 KCTD17Q8N5Z5 321 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 FBXL13Q8NEE6 735 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 RSPH1Q8WYR4 309 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 TMIGD2Q96BF3 282 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 ZNF778Q96MU6 729 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 CORO1BQ9BR76 489 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 DDX4Q9NQI0 724 aaKnown RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 XPO7Q9UIA9 1087 aaKnown RBP12.27□□□□□ -0.45
VTI1A-205ENST00000483122 ZNRF3Q9ULT6 936 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
VTI1A-205ENST00000483122 KANSL1LA0AUZ9 987 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 CSDE1O75534 798 aaKnown RBP12.26□□□□□ -0.45
VTI1A-205ENST00000483122 LYPLA1O75608 230 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-205ENST00000483122 COL6A2P12110 1019 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 ENTPD1P49961 510 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 NRLP54845 237 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 HDAC4P56524 1084 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 YWHAGP61981 247 aaKnown RBP eCLIP12.26□□□□□ -0.45
VTI1A-205ENST00000483122 PSMC5P62195 406 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 UBXN2AP68543 259 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 CDKL1Q00532 357 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 WASHC5Q12768 1159 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 SNRNP35Q16560 246 aaKnown RBP12.26□□□□□ -0.45
VTI1A-205ENST00000483122 SLC35B2Q8TB61 432 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 DDI1Q8WTU0 396 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 CSRNP1Q96S65 589 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 Q9H521 79 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 RAB26Q9ULW5 256 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 FOCADQ5VW36 1801 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 TOP3BO95985 862 aaKnown RBP12.26□□□□□ -0.45
VTI1A-205ENST00000483122 WEE2P0C1S8 567 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 TFPTP0C1Z6 253 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 PTGER2P43116 358 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 NR1H2P55055 460 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 MTTPP55157 894 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 CDK18Q07002 472 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 PDK1Q15118 436 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 PADI6Q6TGC4 694 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 RSPH3Q86UC2 560 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 SLC15A3Q8IY34 581 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 PDIK1LQ8N165 341 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 FBXW8Q8N3Y1 598 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 GFM2Q969S9 779 aaKnown RBP12.26□□□□□ -0.45
VTI1A-205ENST00000483122 MKL1Q969V6 931 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 SH2D3AQ9BRG2 576 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 LXNQ9BS40 222 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 AMNQ9BXJ7 453 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 UNC45AQ9H3U1 944 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 TUT1Q9H6E5 874 aaKnown RBP12.26□□□□□ -0.45
VTI1A-205ENST00000483122 XPNPEP1Q9NQW7 623 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 PSMD13Q9UNM6 376 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 SMCHD1A6NHR9 2005 aa12.26□□□□□ -0.45
VTI1A-205ENST00000483122 ASTN2O75129 1339 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 LOC100653049A0A140TA62 436 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 SH3PXD2BA1X283 911 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 ITM2AO43736 263 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 KRT34O76011 436 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 FOSP01100 380 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 FAM58BPP0C7Q3 252 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 ZFXP17010 805 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 PSMD7P51665 324 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 NAA20P61599 178 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 ZNF252P-AS1Q0IIN9 211 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 BMPR2Q13873 1038 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 USP41Q3LFD5 358 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 ANKDD1AQ495B1 522 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 TTC39BQ5VTQ0 682 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 PLEKHA7Q6IQ23 1121 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 POTEHQ6S545 545 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 ERI1Q8IV48 349 aaKnown RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 CCDC33Q8N5R6 958 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 PPM1NQ8N819 430 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 FEZF2Q8TBJ5 459 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 GIPC3Q8TF64 312 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 TFB1MQ8WVM0 346 aaKnown RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 ITGA11Q9UKX5 1188 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 GNEQ9Y223 722 aaKnown RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 CXorf49A8MYA2 514 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-205ENST00000483122 F8VP50 259 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 GAS7O60861 476 aa12.25□□□□□ -0.45
VTI1A-205ENST00000483122 SIN3BO75182 1162 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms