RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 FRAT1Q92837 279 aaPredicted RBP7.06□□□□□ -1.28
CHD6-209ENST00000482596 TMEM143Q96AN5 459 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 CCDC51Q96ER9 411 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 ATXN7L3BQ96GX2 97 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 SLC22A12Q96S37 553 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 CYP2S1Q96SQ9 504 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 ELF4Q99607 663 aaPredicted RBP7.06□□□□□ -1.28
CHD6-209ENST00000482596 GRIP2Q9C0E4 1043 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 PTPRHQ9HD43 1115 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 ARHGEF4Q9NR80 690 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 RAB6BQ9NRW1 208 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 ZSWIM5Q9P217 1185 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 STK17AQ9UEE5 414 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 MAFFQ9ULX9 164 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 ASB3Q9Y575 518 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 CUBNO60494 3623 aa7.06□□□□□ -1.28
CHD6-209ENST00000482596 CKAP5Q14008 2032 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 IGLV3-22A0A075B6J6 115 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 CDC14CA4D256 554 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 TNFSF15O95150 251 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 NFATC1O95644 943 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 CENPBP07199 599 aaPredicted RBP7.05□□□□□ -1.28
CHD6-209ENST00000482596 NTSR1P30989 418 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 TNFRSF4P43489 277 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 QARSP47897 775 aaKnown RBP7.05□□□□□ -1.28
CHD6-209ENST00000482596 RPL10AP62906 217 aaKnown RBP7.05□□□□□ -1.28
CHD6-209ENST00000482596 HNRNPUQ00839 825 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHD6-209ENST00000482596 E2F1Q01094 437 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
CHD6-209ENST00000482596 POU4F2Q12837 409 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 EGFLAMQ63HQ2 1017 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 CENPPQ6IPU0 288 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 ZNF280DQ6N043 979 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 SLC27A1Q6PCB7 646 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 BORAQ6PGQ7 559 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 TAOK1Q7L7X3 1001 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 PRIMA1Q86XR5 153 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 XYLT1Q86Y38 959 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 ZSCAN1Q8NBB4 408 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 ATAD1Q8NBU5 361 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 RNF149Q8NC42 400 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 C9orf43Q8TAL5 461 aaPredicted RBP7.05□□□□□ -1.28
CHD6-209ENST00000482596 PKNOX2Q96KN3 472 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 GCNAQ96QF7 691 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 ESYT1Q9BSJ8 1104 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 C6orf106Q9H6K1 298 aaPredicted RBP7.05□□□□□ -1.28
CHD6-209ENST00000482596 USP36Q9P275 1121 aaKnown RBP7.05□□□□□ -1.28
CHD6-209ENST00000482596 TCEAL9Q9UHQ7 104 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 TUBD1Q9UJT1 453 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 ANAPC1Q9H1A4 1944 aa7.05□□□□□ -1.28
CHD6-209ENST00000482596 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
CHD6-209ENST00000482596 MYMKA6NI61 221 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 SYN3O14994 580 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 IL2RAP01589 272 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 F11P03951 625 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 WNT1P04628 370 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 THEGLP0DJG4 465 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 ATF6P18850 670 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 NR1D1P20393 614 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 SMARCA1P28370 1054 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 EPHA8P29322 1005 aaPredicted RBP7.04□□□□□ -1.28
CHD6-209ENST00000482596 GRIA2P42262 883 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 MRPL49Q13405 166 aaKnown RBP7.04□□□□□ -1.28
CHD6-209ENST00000482596 ZNF268Q14587 947 aaPredicted RBP7.04□□□□□ -1.28
CHD6-209ENST00000482596 ISXQ2M1V0 245 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 CCDC178Q5BJE1 867 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 IFIT1BQ5T764 474 aaKnown RBP7.04□□□□□ -1.28
CHD6-209ENST00000482596 SFMBT2Q5VUG0 894 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 PLA2G4FQ68DD2 849 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 PLPP7Q8NBV4 271 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 STKLD1Q8NE28 680 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 GIPC2Q8TF65 315 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 PPP1R10Q96QC0 940 aaKnown RBP7.04□□□□□ -1.28
CHD6-209ENST00000482596 ZNF577Q9BSK1 485 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 GSX1Q9H4S2 264 aaPredicted RBP7.04□□□□□ -1.28
CHD6-209ENST00000482596 CBX8Q9HC52 389 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 DISC1Q9NRI5 854 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 TJP2Q9UDY2 1190 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 ENTPD4Q9Y227 616 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 PCDHGA8Q9Y5G5 932 aa7.04□□□□□ -1.28
CHD6-209ENST00000482596 MTMR11A4FU01 709 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 TMEM200CA6NKL6 621 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 WASH3PC4AMC7 463 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 INO80B-WBP1J3KQ70 363 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 SCAMP3O14828 347 aaKnown RBP7.03□□□□□ -1.28
CHD6-209ENST00000482596 TRIM24O15164 1050 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 DFNA5O60443 496 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 C4BPAP04003 597 aaKnown RBP7.03□□□□□ -1.28
CHD6-209ENST00000482596 PCP11498 1178 aaKnown RBP7.03□□□□□ -1.28
CHD6-209ENST00000482596 TPMTP51580 245 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 NLRP12P59046 1061 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 CENPCQ03188 943 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 FAM160A1Q05DH4 1040 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 KLRB1Q12918 225 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 RESTQ13127 1097 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 SEC23AQ15436 765 aa7.03□□□□□ -1.28
CHD6-209ENST00000482596 SP5Q6BEB4 398 aaPredicted RBP7.03□□□□□ -1.28
CHD6-209ENST00000482596 TRMT11Q7Z4G4 463 aaKnown RBP7.03□□□□□ -1.28
CHD6-209ENST00000482596 ADAT2Q7Z6V5 191 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms