RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 ICAM3P32942 547 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 CHI3L2Q15782 390 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 TAF1BQ53T94 588 aaPredicted RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 LMNTD2Q8IXW0 634 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 C2orf69Q8N8R5 385 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 CCDC124Q96CT7 223 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 C12orf42Q96LP6 360 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 ASB7Q9H672 318 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 RBPJLQ9UBG7 517 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 TRUB2O95900 331 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 PAEPP09466 180 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 NCAM1P13591 858 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 BEX3Q00994 111 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 SLC1A5Q15758 541 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 FNBP1LQ5T0N5 605 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 C12orf50Q8NA57 414 aaPredicted RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 ZNF75CPQ92670 426 aaPredicted RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 MRPL45Q9BRJ2 306 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 CYP3A43Q9HB55 503 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 FAM155BO75949 473 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 CETPP11597 493 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 GARSP41250 739 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 ABCG1P45844 678 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 ATXN1P54253 815 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 FBXO47Q5MNV8 452 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 KCNT2Q6UVM3 1135 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 ZCCHC23Q6ZST2 131 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 BBS12Q6ZW61 710 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 PLPPR4Q7Z2D5 763 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 YTHDF3Q7Z739 585 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 TRABD2AQ86V40 505 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 SLC4A11Q8NBS3 891 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 ATXN2LQ8WWM7 1075 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 LENG1Q96BZ8 264 aaPredicted RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 STAMBPL1Q96FJ0 436 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 ZNF560Q96MR9 790 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 NACA2Q9H009 215 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 MYLK2Q9H1R3 596 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.5□□□□□ -0.89
CALD1-220ENST00000482470 ARMCX1Q9P291 453 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 NENFQ9UMX5 172 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 SH3BP1Q9Y3L3 701 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 ZWINTO95229 277 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 CDC25CP30307 473 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 MAP3K7CLP57077 242 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 ELF3P78545 371 aaPredicted RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 SIX1Q15475 284 aaPredicted RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 LRRC38Q5VT99 294 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 VSTM1Q6UX27 236 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 BZW1Q7L1Q6 419 aaKnown RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 XYLT1Q86Y38 959 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 WDR75Q8IWA0 830 aaKnown RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 TRIM42Q8IWZ5 723 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TTC39CQ8N584 583 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 CPT1BQ92523 772 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 CCT6BQ92526 530 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 RMDN2Q96LZ7 410 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TTC1Q99614 292 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 SNRNP25Q9BV90 132 aaKnown RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 RXFP1Q9HBX9 757 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.49□□□□□ -0.892e-6■■■□□ 14.8
CALD1-220ENST00000482470 BFARQ9NZS9 450 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TLK1Q9UKI8 766 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 LAMB2P55268 1798 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 MAST2Q6P0Q8 1798 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 NRAPQ86VF7 1730 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 LOC100653049A0A140TA62 436 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TCRBV7S3A2A0A539 114 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 H3BRJ5 948 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 DFFAO00273 331 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 CFLARO15519 480 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 B4GALT4O60513 344 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 KRT34O76011 436 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 ATP6V1G2O95670 118 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 SERPINB6P35237 376 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TAF6P49848 677 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 RABGGTBP53611 331 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TPI1P60174 286 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 ADIGQ0VDE8 80 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 STILQ15468 1287 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TAF1CQ15572 869 aaPredicted RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 SPRED3Q2MJR0 410 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 SLC10A6Q3KNW5 377 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TSHZ1Q6ZSZ6 1077 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 MCUQ8NE86 351 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 NSMCE1Q8WV22 266 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 SEC14L1Q92503 715 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 EDEM1Q92611 657 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 NXF3Q9H4D5 531 aaKnown RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 SLC17A7Q9P2U7 560 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 TUBGCP4Q9UGJ1 667 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 SLC24A2Q9UI40 661 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 DRG1Q9Y295 367 aaKnown RBP9.49□□□□□ -0.89
CALD1-220ENST00000482470 ALOX15BO15296 676 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 HCRTO43612 131 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 ITGAVP06756 1048 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 MYL2P10916 166 aa9.49□□□□□ -0.89
CALD1-220ENST00000482470 CALRP27797 417 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms