RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PAEPP09466 180 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 VDRP11473 427 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 DRD1P21728 446 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 ATP5C1P36542 298 aaKnown RBP12.52□□□□□ -0.41
HMGN1-213ENST00000482192 PGFP49763 221 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 GALK1P51570 392 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 BCAT1P54687 386 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 GAS6Q14393 721 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 DPCR1Q3MIW9 517 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 KLHDC10Q6PID8 442 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 TMEM270Q6UE05 265 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 ASCL5Q7RTU5 278 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 ATRIPQ8WXE1 791 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 NELL1Q92832 810 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 CD101Q93033 1021 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 OTUB2Q96DC9 234 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 CNOT6LQ96LI5 555 aaKnown RBP12.52□□□□□ -0.41
HMGN1-213ENST00000482192 MED15Q96RN5 788 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 INTS2Q9H0H0 1204 aaKnown RBP12.52□□□□□ -0.41
HMGN1-213ENST00000482192 LMBRD1Q9NUN5 540 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 ZSCAN32Q9NX65 697 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 NAGPAQ9UK23 515 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 TSPAN16Q9UKR8 245 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
HMGN1-213ENST00000482192 A0A1W2PQH9 124 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 O00370 1275 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 SCAMP3O14828 347 aaKnown RBP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 XPO1O14980 1071 aaKnown RBP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 ATG13O75143 517 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 ADH1CP00326 375 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 EGFP01133 1207 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 CYP17A1P05093 508 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 RALAP11233 206 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 NRLP54845 237 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 SATB1Q01826 763 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 BST2Q10589 180 aaKnown RBP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 FBXO43Q4G163 708 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 RRAGAQ7L523 313 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 CREBRFQ8IUR6 639 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 ARHGAP18Q8N392 663 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 ZNF276Q8N554 614 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 ZBTB44Q8NCP5 570 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.51□□□□□ -0.41
HMGN1-213ENST00000482192 CLIC5Q9NZA1 410 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 WDFY4Q6ZS81 3184 aa12.51□□□□□ -0.41
HMGN1-213ENST00000482192 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 TBX18O95935 607 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 LMNAP02545 664 aaKnown RBP12.5□□□□□ -0.41
HMGN1-213ENST00000482192 TDGF1P13385 188 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 RARGP13631 454 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 ERCC5P28715 1186 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-213ENST00000482192 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 TKTL1P51854 596 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 PDE4CQ08493 712 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 DHCR24Q15392 516 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 STILQ15468 1287 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 C10orf120Q5SQS8 335 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 NAIF1Q69YI7 327 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-213ENST00000482192 LCLAT1Q6UWP7 414 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 ARHGEF19Q8IW93 802 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 FAM114A1Q8IWE2 563 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 RBBP8NLQ8NC74 664 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-213ENST00000482192 CCDC26Q8TAB7 109 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 KAT5Q92993 513 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 FAM81BQ96LP2 452 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 IPO9Q96P70 1041 aaKnown RBP12.5□□□□□ -0.41
HMGN1-213ENST00000482192 KLF16Q9BXK1 252 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-213ENST00000482192 THAP9Q9H5L6 903 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 LRRC4Q9HBW1 653 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
HMGN1-213ENST00000482192 ZNF638Q14966 1978 aaKnown RBP12.5□□□□□ -0.41
HMGN1-213ENST00000482192 CHURC1-FNTBB4DL54 471 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 LILRB5O75023 590 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 RNF40O75150 1001 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 ZBED1O96006 694 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 IRF1P10914 325 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 ADH5P11766 374 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 OPRD1P41143 372 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 EIF2DP41214 584 aaKnown RBP12.49□□□□□ -0.41
HMGN1-213ENST00000482192 MTIF2P46199 727 aaKnown RBP12.49□□□□□ -0.41
HMGN1-213ENST00000482192 ZNF132P52740 706 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 YWHAGP61981 247 aaKnown RBP eCLIP12.49□□□□□ -0.41
HMGN1-213ENST00000482192 GAB4Q2WGN9 574 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 CT47A1Q5JQC4 288 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms