RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 IFNKQ9P0W0 207 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 IMPACTQ9P2X3 320 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 CYTH4Q9UIA0 394 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 DNAJC12Q9UKB3 198 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 NUDT5Q9UKK9 219 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.89□□□□□ -0.35
PTPRF-213ENST00000481019 FHOD1Q9Y613 1164 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
PTPRF-213ENST00000481019 SOBPA7XYQ1 873 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 LEFTY2O00292 366 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 XPO1O14980 1071 aaKnown RBP12.88□□□□□ -0.35
PTPRF-213ENST00000481019 MDM4O15151 490 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 CHADO15335 359 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
PTPRF-213ENST00000481019 TPM1P09493 284 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 GLULP15104 373 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 COL9A1P20849 921 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 RGS7P49802 495 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 MFAP3P55082 362 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 STARD6P59095 220 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 SLC7A9P82251 487 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 BST2Q10589 180 aaKnown RBP12.88□□□□□ -0.35
PTPRF-213ENST00000481019 CNGA2Q16280 664 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 KLHDC7AQ5VTJ3 777 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 NAIF1Q69YI7 327 aaPredicted RBP12.88□□□□□ -0.35
PTPRF-213ENST00000481019 PMF1Q6P1K2 205 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 TPRG1Q6ZUI0 275 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 YAF2Q8IY57 180 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 SLC35F5Q8WV83 523 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 OVCA2Q8WZ82 227 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 DNASE1L2Q92874 299 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 E2F7Q96AV8 911 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 FAM83CQ9BQN1 747 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 ULBP1Q9BZM6 244 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 UBXN6Q9BZV1 441 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 GANQ9H2C0 597 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 LINC00597Q9H2U6 94 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 EHD2Q9NZN4 543 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 KIAA1257Q9ULG3 409 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 ARHGAP26Q9UNA1 814 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 SIK3Q9Y2K2 1263 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 CPQQ9Y646 472 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
PTPRF-213ENST00000481019 F5P12259 2224 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 A0A1B0GTH6 734 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 M0QYV0 167 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 DCNP07585 359 aaKnown RBP12.87□□□□□ -0.35
PTPRF-213ENST00000481019 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
PTPRF-213ENST00000481019 TARSP26639 723 aaKnown RBP12.87□□□□□ -0.35
PTPRF-213ENST00000481019 AVPR2P30518 371 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 CLCN1P35523 988 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 USP8P40818 1118 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 PPP3CCP48454 512 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 TKTL1P51854 596 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 BCAT1P54687 386 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 GSDMDP57764 484 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 PFKPQ01813 784 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 FZD5Q13467 585 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 MTF1Q14872 753 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 NR1I3Q14994 352 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 HS1BP3Q53T59 392 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 HECTD3Q5T447 861 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
PTPRF-213ENST00000481019 TXNDC11Q6PKC3 985 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 PDZD8Q8NEN9 1154 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 CLEC4CQ8WTT0 213 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 IRF7Q92985 503 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 XPO4Q9C0E2 1151 aaKnown RBP12.87□□□□□ -0.35
PTPRF-213ENST00000481019 MFSD1Q9H3U5 465 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 FBXO44Q9H4M3 255 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 EBF3Q9H4W6 596 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 DLGAP2Q9P1A6 1054 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 CFAP97Q9P2B7 532 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 ZMYM5Q9UJ78 669 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPRF-213ENST00000481019 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 MYO15AQ9UKN7 3530 aa12.87□□□□□ -0.35
PTPRF-213ENST00000481019 FAM170AA1A519 330 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 TEX33O43247 280 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 GREM1O60565 184 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 TLR5O60602 858 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 MBL2P11226 248 aaPredicted RBP12.86□□□□□ -0.35
PTPRF-213ENST00000481019 RARGP13631 454 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 TCF3P15923 654 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 AOC1P19801 751 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 GPD2P43304 727 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 ADIGQ0VDE8 80 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 TRIM14Q14142 442 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 DRAP1Q14919 205 aaPredicted RBP12.86□□□□□ -0.35
PTPRF-213ENST00000481019 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 PM20D1Q6GTS8 502 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 ENOSF1Q7L5Y1 443 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 SLC47A2Q86VL8 602 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
PTPRF-213ENST00000481019 FAM71AQ8IYT1 594 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms