RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 RRM1P23921 792 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 PIK3R1P27986 724 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 RTP1P59025 263 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ITGB3BPQ13352 177 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 EMC2Q15006 297 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NFE2Q16621 373 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 INSCQ1MX18 579 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SV2CQ496J9 727 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ANKS6Q68DC2 871 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NAIF1Q69YI7 327 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TWF2Q6IBS0 349 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SV2AQ7L0J3 742 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CATSPER3Q86XQ3 398 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 MAB21L3Q8N8X9 362 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 PNPT1Q8TCS8 783 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 WNK4Q96J92 1243 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 DUSP9Q99956 384 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 GINS4Q9BRT9 223 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 AASDHPPTQ9NRN7 309 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 C3orf18Q9UK00 162 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 LRFN2Q9ULH4 789 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NPHP3-ACAD11A0A0J9YXS1 232 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT87PA6NCN2 255 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 GOLGA8RI6L899 631 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 STX7O15400 261 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 GCLCP48506 637 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC18A1P54219 525 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 OTUD4Q01804 1114 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ST3GAL1Q11201 340 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 WASHC5Q12768 1159 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TBL3Q12788 808 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 GIT2Q14161 759 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 DUPD1Q68J44 220 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 FASTKD5Q7L8L6 764 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TTC30AQ86WT1 665 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 DHFR2Q86XF0 187 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 EPS8L3Q8TE67 593 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TFB1MQ8WVM0 346 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 MCEEQ96PE7 176 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SEMA6BQ9H3T3 888 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 H2AFY2Q9P0M6 372 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ATXN10Q9UBB4 475 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TJP2Q9UDY2 1190 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 DNAJC16Q9Y2G8 782 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CLUHO75153 1309 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ALOX15BO15296 676 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 AP5Z1O43299 807 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 RAP1GAPP47736 663 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ATXN3P54252 364 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 FRG1Q14331 258 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 DCAF4L1Q3SXM0 396 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 MCOLN2Q8IZK6 566 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ST13P5Q8NFI4 369 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 RFWD2Q8NHY2 731 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 PDCD6IPQ8WUM4 868 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 OSBPL6Q9BZF3 934 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 CASS4Q9NQ75 786 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 LATS2Q9NRM7 1088 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.34□□□□□ -1.393e-7■■□□□ 13
PRPF4B-205ENST00000480058 MBD2Q9UBB5 411 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC39A10Q9ULF5 831 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 UNC13BO14795 1591 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 HDAC3O15379 428 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 PHGDHO43175 533 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 EDF1O60869 148 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF23P17027 643 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 FGFR2P21802 821 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 DRD4P21917 467 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ADARP55265 1226 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 POU4F1Q01851 419 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ACVR2BQ13705 512 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 BMT2Q1RMZ1 405 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 OLFML2BQ68BL8 750 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 PDPK2PQ6A1A2 396 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 WDR49Q8IV35 697 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 PDPRQ8NCN5 879 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 APPL2Q8NEU8 664 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 KBTBD8Q8NFY9 601 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 RP9Q8TA86 221 aaKnown RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF75CPQ92670 426 aaPredicted RBP6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 KIF12Q96FN5 646 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 DCUN1D1Q96GG9 259 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 KATNAL1Q9BW62 490 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 OSBPL11Q9BXB4 747 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 PNPLA3Q9NST1 481 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 USP32Q8NFA0 1604 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 CARNS1A5YM72 827 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 VWA5AO00534 786 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 HMGCRP04035 888 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 HLA-DPA1P20036 260 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 PBX1P40424 430 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 C21orf59P57076 290 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 CLEC16AQ2KHT3 1053 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 TMEM119Q4V9L6 283 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 ARMC4Q5T2S8 1044 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 GRTP1Q5TC63 336 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 MROH9Q5TGP6 573 aa6.34□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT74Q7RTS7 529 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms