RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 LRRIQ4A6NIV6 560 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 H7C0C1 242 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 ICAM1P05362 532 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 VAV1P15498 845 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 ATP5OP48047 213 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 INHBCP55103 352 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 DEUP1Q05D60 604 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 ORC1Q13415 861 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 PGM5Q15124 567 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 FAM160B2Q86V87 743 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 HAPLN3Q96S86 360 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 IMPG2Q9BZV3 1241 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 KLHL4Q9C0H6 718 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 GPAMQ9HCL2 828 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 RFPL1O75677 317 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 SERPINA6P08185 405 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 UQCRBP14927 111 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 CD19P15391 556 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 HADHQ16836 314 aaKnown RBP21.52■■□□□ 1.03
COL13A1-208ENST00000479733 TEX44Q53QW1 395 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 NME8Q8N427 588 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 GCNAQ96QF7 691 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 ATXN10Q9UBB4 475 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 PCDHA10Q9Y5I2 948 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 MAD1L1Q9Y6D9 718 aa21.52■■□□□ 1.03
COL13A1-208ENST00000479733 BTAF1O14981 1849 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 SPDYE2BA6NHP3 402 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 SPDYE6P0CI01 402 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 CAP2P40123 477 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 SCNN1BP51168 640 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 CLDN10P78369 228 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 MAP3K10Q02779 954 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 SPDYE2Q495Y8 402 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 RABGAP1LQ5R372 815 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 POLNQ7Z5Q5 900 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 DTNBP1Q96EV8 351 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 FEM1BQ9UK73 627 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 TTLL3Q9Y4R7 772 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 HNRNPRO43390 633 aaKnown RBP21.51■■□□□ 1.03
COL13A1-208ENST00000479733 ITM2AO43736 263 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 KRT7P08729 469 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 ROR1Q01973 937 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 PDK3Q15120 406 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 TRIM42Q8IWZ5 723 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 CISHQ9NSE2 258 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 IL1RAPL1Q9NZN1 696 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 SIRPGQ9P1W8 387 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 FBXO40Q9UH90 709 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 SCAF8Q9UPN6 1271 aaKnown RBP21.51■■□□□ 1.03
COL13A1-208ENST00000479733 SLC4A7Q9Y6M7 1214 aa21.51■■□□□ 1.03
COL13A1-208ENST00000479733 ENTPD3O75355 529 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 PABPC4LP0CB38 370 aaKnown RBP21.5■■□□□ 1.03
COL13A1-208ENST00000479733 MYL6P60660 151 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 USP46P62068 366 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 KRT76Q01546 638 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 CCNIQ14094 377 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 DPY19L2Q6NUT2 758 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 DENND1BQ6P3S1 775 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 NIPA1Q7RTP0 329 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 HPS6Q86YV9 775 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 XAB2Q9HCS7 855 aaKnown RBP21.5■■□□□ 1.03
COL13A1-208ENST00000479733 GALNT8Q9NY28 637 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 ARHGAP28Q9P2N2 729 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 SERPINA10Q9UK55 444 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 DNAJC16Q9Y2G8 782 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 IL1BP01584 269 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 APRTP07741 180 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 CSH1P0DML2 217 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 CSH2P0DML3 217 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 PSMC1P62191 440 aaKnown RBP21.5■■□□□ 1.03
COL13A1-208ENST00000479733 PTPN20Q4JDL3 420 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 TRMT10BQ6PF06 316 aaKnown RBP21.5■■□□□ 1.03
COL13A1-208ENST00000479733 DNAJB4Q9UDY4 337 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 PPME1Q9Y570 386 aa21.5■■□□□ 1.03
COL13A1-208ENST00000479733 RAG1P15918 1043 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 YWHAZP63104 245 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 PABPC1LQ4VXU2 614 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 ARHGEF16Q5VV41 709 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 KLRG2A4D1S0 409 aaPredicted RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 CAPN8A6NHC0 703 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 SDR42E2A6NKP2 422 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 KCNA4P22459 653 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 SFNP31947 248 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 RPL10AP62906 217 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 HNRNPDQ14103 355 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 TTLL12Q14166 644 aaPredicted RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 VWA5B1Q5TIE3 1220 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 FBXL19Q6PCT2 694 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 KYAT3Q6YP21 454 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 ITFG2Q969R8 447 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 LOXHD1Q8IVV2 1947 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 APOC4-APOC2K7ER74 178 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 PIK3R2O00459 728 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 APOC2P02655 101 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 BPGMP07738 259 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 MAP7Q14244 749 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 RAB6CQ53S08 254 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 LGSNQ5TDP6 509 aa21.49■■□□□ 1.03
COL13A1-208ENST00000479733 ANGEL2Q5VTE6 544 aaKnown RBP21.49■■□□□ 1.03
COL13A1-208ENST00000479733 OLFML2BQ68BL8 750 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms