RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 CTNNB1P35222 781 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 BMPR1AP36894 532 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 CETN2P41208 172 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 MAGEA10P43363 369 aaPredicted RBP12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 MARCKSL1P49006 195 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 RABGGTBP53611 331 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 SLC25A11Q02978 314 aaKnown RBP12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 UBE3AQ05086 875 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 RAB33AQ14088 237 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 SLC25A52Q3SY17 297 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 DENND5BQ6ZUT9 1274 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 DEFB106AQ8N104 65 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 ARHGAP18Q8N392 663 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 KLHL23Q8NBE8 558 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 FAM172AQ8WUF8 416 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 CENPIQ92674 756 aaPredicted RBP12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 RBM41Q96IZ5 413 aaKnown RBP12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 CFAP57Q96MR6 1250 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 SAMD11Q96NU1 681 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 C11orf84Q9BUA3 381 aaPredicted RBP12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 EHD2Q9NZN4 543 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 USP18Q9UMW8 372 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 COL4A4P53420 1690 aaPredicted RBP12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 PLXNA3P51805 1871 aa12.51□□□□□ -0.41
TM9SF4-206ENST00000479591 LCHNA4D1U4 455 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 LINC01553A4QN01 128 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 C5orf67F2Z3F1 127 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 PDE2AO00408 941 aaPredicted RBP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 ADAM12O43184 909 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 PRPSAP2O60256 369 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 LILRB3O75022 631 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 ZRANB2O95218 330 aaKnown RBP eCLIP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 RB1P06400 928 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 PYGMP11217 842 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 ATF2P15336 505 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 RPL17P18621 184 aaKnown RBP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 MIPP30301 263 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 GTF2F1P35269 517 aaKnown RBP eCLIP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 COPS2P61201 443 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 ATP11AP98196 1134 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 DUSP4Q13115 394 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 DDR2Q16832 855 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 CDO1Q16878 200 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 C15orf59Q2T9L4 293 aaPredicted RBP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 BOLA3Q53S33 107 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 ODF2Q5BJF6 829 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 C9orf50Q5SZB4 431 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 DAB2IPQ5VWQ8 1189 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 BHLHA9Q7RTU4 235 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 RCOR2Q8IZ40 523 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 SCAMP5Q8TAC9 235 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 MAIP1Q8WWC4 291 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 NDRG1Q92597 394 aaKnown RBP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 NT5C3BQ969T7 300 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 TBCBQ99426 244 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 NGRNQ9NPE2 291 aaKnown RBP12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 ABCC13Q9NSE7 274 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 IL37Q9NZH6 218 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 SCML2Q9UQR0 700 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 PLXNA4Q9HCM2 1894 aa12.5□□□□□ -0.41
TM9SF4-206ENST00000479591 MYO16Q9Y6X6 1858 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 FAM92AA1XBS5 289 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 TADA3O75528 432 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 ENDOD1O94919 500 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 TRUB2O95900 331 aaKnown RBP12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 FGGP02679 453 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 FYNP06241 537 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 DNAJB2P25686 324 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 ELF1P32519 619 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 GPR15P49685 360 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 PSEN1P49768 467 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 SULT1E1P49888 294 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 YWHAGP61981 247 aaKnown RBP eCLIP12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 ZNF211Q13398 564 aaPredicted RBP12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 SMC1AQ14683 1233 aaKnown RBP12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 SHHQ15465 462 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 LONRF2Q1L5Z9 754 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 ZFYVE27Q5T4F4 411 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 BSPRYQ5W0U4 402 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 HFE2Q6ZVN8 426 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 BNIPLQ7Z465 357 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 MON1AQ86VX9 555 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 TTC9BQ8N6N2 239 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 SPATA4Q8NEY3 305 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 TEKT4Q8WW24 435 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 PGAP3Q96FM1 320 aaPredicted RBP12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 NPY6RQ99463 290 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 CRISPLD1Q9H336 500 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 PCDHA11Q9Y5I1 949 aa12.49□□□□□ -0.41
TM9SF4-206ENST00000479591 IRAK3Q9Y616 596 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms