RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 LIMS2Q7Z4I7 341 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 BBS7Q8IWZ6 715 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 SCUBE3Q8IX30 993 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 ZCCHC9Q8N567 271 aaKnown RBP18.46■□□□□ 0.55
HMGN1-212ENST00000479586 BAHD1Q8TBE0 780 aaPredicted RBP18.46■□□□□ 0.55
HMGN1-212ENST00000479586 RAD54LQ92698 747 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 FOXJ1Q92949 421 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 OTUB2Q96DC9 234 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 MRGPRX1Q96LB2 322 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 PRDM16Q9HAZ2 1276 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 SPHK2Q9NRA0 654 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 TMEM30AQ9NV96 361 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 FNDC3AQ9Y2H6 1198 aaKnown RBP18.46■□□□□ 0.55
HMGN1-212ENST00000479586 STARD13Q9Y3M8 1113 aa18.46■□□□□ 0.55
HMGN1-212ENST00000479586 A0A1B0GTW7 788 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 FAM149AA5PLN7 773 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 GOLGA8CPA6NN73 597 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 MEI4A8MW99 385 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 COCHO43405 550 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 PPP1R37O75864 691 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 DKK1O94907 266 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 CAMK2BQ13554 666 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 MAPRE1Q15691 268 aaKnown RBP18.45■□□□□ 0.54
HMGN1-212ENST00000479586 PREPLQ4J6C6 727 aaPredicted RBP18.45■□□□□ 0.54
HMGN1-212ENST00000479586 MDH1BQ5I0G3 518 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 TDRD10Q5VZ19 366 aaKnown RBP18.45■□□□□ 0.54
HMGN1-212ENST00000479586 KIAA1324Q6UXG2 1013 aaKnown RBP18.45■□□□□ 0.54
HMGN1-212ENST00000479586 ZNF720Q7Z2F6 126 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 SFR1Q86XK3 245 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 WBP2Q969T9 261 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 CALML4Q96GE6 196 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 C8orf48Q96LL4 319 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 SLITRK1Q96PX8 696 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 GABRG3Q99928 467 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 GAREM1Q9H706 876 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 PDE11AQ9HCR9 933 aa18.45■□□□□ 0.54
HMGN1-212ENST00000479586 NAV2Q8IVL1 2488 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 KNL1Q8NG31 2342 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 GOLGA8IPA6NC78 632 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 GOLGA8JA6NMD2 632 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 CILPO75339 1184 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 BNC1Q01954 994 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 RILPL1Q5EBL4 403 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 GRAMD4Q6IC98 578 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 SDE2Q6IQ49 451 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 NUDT18Q6ZVK8 323 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 DPH6Q7L8W6 267 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 PIP4K2CQ8TBX8 421 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 MYCBPAPQ8TBZ2 947 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 DNASE2BQ8WZ79 361 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 SLC39A7Q92504 469 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 DCBLD2Q96PD2 775 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 MIR1-1HGQ9H1L0 117 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 TM7SF3Q9NS93 570 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 DNAJC17Q9NVM6 304 aaKnown RBP18.44■□□□□ 0.54
HMGN1-212ENST00000479586 SH3BP1Q9Y3L3 701 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 NME7Q9Y5B8 376 aa18.44■□□□□ 0.54
HMGN1-212ENST00000479586 PRRT4C9JH25 899 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 SLC26A4O43511 780 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 TMEM191BP0C7N4 346 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 ZNF883P0CG24 379 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 WARSP23381 471 aaKnown RBP18.43■□□□□ 0.54
HMGN1-212ENST00000479586 CD6P30203 668 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 DDIT3P35638 169 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 UBA7P41226 1012 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 MATKP42679 507 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 ABCG1P45844 678 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 MYO1EQ12965 1108 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 ARL6IP4Q66PJ3 421 aaKnown RBP18.43■□□□□ 0.54
HMGN1-212ENST00000479586 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 HS2ST1Q7LGA3 356 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 NOC3LQ8WTT2 800 aaKnown RBP18.43■□□□□ 0.54
HMGN1-212ENST00000479586 HVCN1Q96D96 273 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 TOE1Q96GM8 510 aaKnown RBP18.43■□□□□ 0.54
HMGN1-212ENST00000479586 HPDLQ96IR7 371 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 AK8Q96MA6 479 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 STRA6Q9BX79 667 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 TRIM9Q9C026 710 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 PTPRJQ12913 1337 aa18.43■□□□□ 0.54
HMGN1-212ENST00000479586 CYSRT1A8MQ03 144 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 CER1O95813 267 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 IRF1P10914 325 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 NCAM1P13591 858 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 HLA-BQ31612 363 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 GALNT15Q8N3T1 639 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 OR5B17Q8NGF7 314 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 RHBDD1Q8TEB9 315 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 FBXO32Q969P5 355 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 CDC6Q99741 560 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 GPR174Q9BXC1 333 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 ZNF518BQ9C0D4 1074 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 CCSER2Q9H7U1 834 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 WSB2Q9NYS7 404 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-212ENST00000479586 BTBD3Q9Y2F9 522 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 CABIN1Q9Y6J0 2220 aa18.42■□□□□ 0.54
HMGN1-212ENST00000479586 WASH3PC4AMC7 463 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 NEDD8-MDP1E9PL57 170 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 FLRT2O43155 660 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 PLA2G2AP14555 144 aa18.41■□□□□ 0.54
HMGN1-212ENST00000479586 YWHAQP27348 245 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms