RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	ZMIZ2	Q8NF64	920 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	RPLP0P6	Q8NHW5	317 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	SEMA4D	Q92854	862 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ERCC4	Q92889	916 aa	Predicted RBP	13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CEP63	Q96MT8	703 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TWNK	Q96RR1	684 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PNKP	Q96T60	521 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	USP18	Q9UMW8	372 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	DMD	P11532	3685 aa		13	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ZNF292	O60281	2723 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	GPR179	Q6PRD1	2367 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PRR5-ARHGAP8	B1AHC4	643 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	FOXD2	O60548	495 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	RPP40	O75818	363 aa	Known RBP	12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	APBB3	O95704	486 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	APOD	P05090	189 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CYP17A1	P05093	508 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CCDC192	P0DO97	292 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ADH5	P11766	374 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TBXAS1	P24557	533 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	EIF2D	P41214	584 aa	Known RBP	12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ARHGAP8	P85298	464 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	LMNB2	Q03252	620 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	DMWD	Q09019	674 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	C10orf120	Q5SQS8	335 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	KLHL10	Q6JEL2	608 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	RHBDF2	Q6PJF5	856 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ARHGAP18	Q8N392	663 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	WHAMM	Q8TF30	809 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	UBXN6	Q9BZV1	441 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	DNMT3L	Q9UJW3	386 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	NAGPA	Q9UK23	515 aa		12.99	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	SCAMP3	O14828	347 aa	Known RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	AXIN1	O15169	862 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CYP26A1	O43174	497 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	LRP3	O75074	770 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	FGFR1OP	O95684	399 aa	Known RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	GNA14	O95837	355 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	IRF1	P10914	325 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	RARG	P13631	454 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	OPRD1	P41143	372 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	GRIA2	P42262	883 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TNFRSF4	P43489	277 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PLA2G4A	P47712	749 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PXN	P49023	591 aa	Predicted RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	KIF11	P52732	1056 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PMS1	P54277	932 aa	Known RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	MRPS21	P82921	87 aa	Known RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CUL2	Q13617	745 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	DMC1	Q14565	340 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ANO4	Q32M45	955 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CBWD6	Q4V339	395 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	C2orf27A	Q580R0	203 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CBWD3	Q5JTY5	395 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CBWD5	Q5RIA9	395 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	LY6G5C	Q5SRR4	150 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	NAIF1	Q69YI7	327 aa	Predicted RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	PKN3	Q6P5Z2	889 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	KLHDC10	Q6PID8	442 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ERMP1	Q7Z2K6	904 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CACNA2D4	Q7Z3S7	1137 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	GAB3	Q8WWW8	586 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TATDN2	Q93075	761 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	DUSP9	Q99956	384 aa	Known RBP	12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CYLD	Q9NQC7	956 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ARHGEF4	Q9NR80	690 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	C2orf42	Q9NWW7	574 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	WDR35	Q9P2L0	1181 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	DEC1	Q9P2X7	70 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	HESX1	Q9UBX0	185 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	MAN1B1	Q9UKM7	699 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	KIAA1257	Q9ULG3	409 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	COQ4	Q9Y3A0	265 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	COL4A2	P08572	1712 aa		12.98	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	OTOGL	Q3ZCN5	2332 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	SPTBN4	Q9H254	2564 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584		A0A1W2PQH9	124 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TRIM49B	A6NDI0	452 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TBC1D3B	A6NDS4	549 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	HHLA1	C9JL84	531 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ALDH1A2	O94788	518 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	KAT7	O95251	611 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TBX18	O95935	607 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CD19	P15391	556 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	RAD23B	P54727	409 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	SEC13	P55735	322 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	SRSF5	Q13243	272 aa	Known RBP	12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	HSF5	Q4G112	596 aa	Predicted RBP	12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	SGO2	Q562F6	1265 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	FOXR2	Q6PJQ5	311 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	HTR3D	Q70Z44	454 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	GPRIN1	Q7Z2K8	1008 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	CCDC186	Q7Z3E2	898 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	ANKRD52	Q8NB46	1076 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	SLC4A11	Q8NBS3	891 aa		12.97	□□□□□ -0.33
CDK5RAP2-211	ENST00000479584	TSTD1	Q8NFU3	115 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms