RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 DMXL2Q8TDJ6 3036 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 COCHO43405 550 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 TUBP50607 506 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 DUOXA2Q1HG44 320 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 HECTD3Q5T447 861 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 EGFLAMQ63HQ2 1017 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 ZNF419Q96HQ0 510 aaPredicted RBP17.1■□□□□ 0.33
DDX56-210ENST00000479440 ZFRQ96KR1 1074 aaKnown RBP17.1■□□□□ 0.33
DDX56-210ENST00000479440 DNAJC17Q9NVM6 304 aaKnown RBP17.1■□□□□ 0.33
DDX56-210ENST00000479440 TBC1D7Q9P0N9 293 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
DDX56-210ENST00000479440 MEI4A8MW99 385 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 PRPF6O94906 941 aaKnown RBP17.09■□□□□ 0.33
DDX56-210ENST00000479440 TNNC1P63316 161 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 GRIN1Q05586 938 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 WDR49Q8IV35 697 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 BBS7Q8IWZ6 715 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 NUP93Q8N1F7 819 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 OR6B3Q8NGW1 331 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
DDX56-210ENST00000479440 XPO6Q96QU8 1125 aaKnown RBP17.09■□□□□ 0.33
DDX56-210ENST00000479440 GABRG3Q99928 467 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 NACA2Q9H009 215 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 PCOLCE2Q9UKZ9 415 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 RAXQ9Y2V3 346 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 PCNX2A6NKB5 2137 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 CACNA1EQ15878 2313 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 FREM2Q5SZK8 3169 aa17.09■□□□□ 0.33
DDX56-210ENST00000479440 CEP192Q8TEP8 1941 aa17.08■□□□□ 0.33
DDX56-210ENST00000479440 PTPRJQ12913 1337 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 A0A1B0GTW7 788 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 TACC1O75410 805 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 CER1O95813 267 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 GNL1P36915 607 aaPredicted RBP17.08■□□□□ 0.32
DDX56-210ENST00000479440 CACNA2D1P54289 1103 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 KIAA1324Q6UXG2 1013 aaKnown RBP17.08■□□□□ 0.32
DDX56-210ENST00000479440 MIB1Q86YT6 1006 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 OR5B17Q8NGF7 314 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 SETD7Q8WTS6 366 aaKnown RBP17.08■□□□□ 0.32
DDX56-210ENST00000479440 ZNF518BQ9C0D4 1074 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 CD248Q9HCU0 757 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 KIAA1522Q9P206 1035 aaPredicted RBP17.08■□□□□ 0.32
DDX56-210ENST00000479440 DKK4Q9UBT3 224 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 NFE2L3Q9Y4A8 694 aa17.08■□□□□ 0.32
DDX56-210ENST00000479440 ANKRD11Q6UB99 2663 aaPredicted RBP17.08■□□□□ 0.32
DDX56-210ENST00000479440 ZNF233A6NK53 670 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 NEDD8-MDP1E9PL57 170 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 GFRA2O00451 464 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 CACNG3O60359 315 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 CBFA2T3O75081 653 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 FAM163BP0C2L3 166 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 IRF1P10914 325 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 IDEP14735 1019 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 PTPN1P18031 435 aaKnown RBP17.07■□□□□ 0.32
DDX56-210ENST00000479440 GJB2P29033 226 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 CD6P30203 668 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 TXLNAP40222 546 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 PI4KAP42356 2102 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 CASP5P51878 434 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 SNX30Q5VWJ9 437 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 TMEM25Q86YD3 366 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 LRIG1Q96JA1 1093 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 MRPL45Q9BRJ2 306 aaKnown RBP17.07■□□□□ 0.32
DDX56-210ENST00000479440 HCN2Q9UL51 889 aa17.07■□□□□ 0.32
DDX56-210ENST00000479440 DSPP15924 2871 aaKnown RBP17.06■□□□□ 0.32
DDX56-210ENST00000479440 A8MXQ7 604 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 ZNF883P0CG24 379 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 SLC5A3P53794 718 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 IL27RAQ6UWB1 636 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 TMPRSS7Q7RTY8 843 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 BRAPQ7Z569 592 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 COL26A1Q96A83 441 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 DNAJC19Q96DA6 116 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 MRGPRX1Q96LB2 322 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 ACOX2Q99424 681 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 BBS2Q9BXC9 721 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 DPEP3Q9H4B8 488 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 CCSER2Q9H7U1 834 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 CD93Q9NPY3 652 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 TMEM30AQ9NV96 361 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 RAD54BQ9Y620 910 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 ITPR1Q14643 2758 aa17.06■□□□□ 0.32
DDX56-210ENST00000479440 CLDN5O00501 218 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 TRIM24O15164 1050 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 FLRT2O43155 660 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 NCAM1P13591 858 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 TYRP14679 529 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 MAOBP27338 520 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 MATKP42679 507 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 STARD3Q14849 445 aa17.05■□□□□ 0.32
DDX56-210ENST00000479440 SF3A1Q15459 793 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms