RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SLC44A4Q53GD3 710 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 LY6G5CQ5SRR4 150 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 FNDC7Q5VTL7 733 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 RHOUQ7L0Q8 258 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 COLGALT2Q8IYK4 626 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 Q8NA96 180 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 PJA1Q8NG27 643 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 PROKR1Q8TCW9 393 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 NACC2Q96BF6 587 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 ERO1AQ96HE7 468 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 PRAM1Q96QH2 718 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 DPH1Q9BZG8 443 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 MMRN2Q9H8L6 949 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 ZNF287Q9HBT7 754 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 ARNT2Q9HBZ2 717 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 TMEM74BQ9NUR3 256 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 CPNE7Q9UBL6 633 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 SRP68Q9UHB9 627 aaKnown RBP6.1□□□□□ -1.43
CCDC171-207ENST00000478913 TMX2Q9Y320 296 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 PAXBP1Q9Y5B6 917 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 ZFHX2Q9C0A1 2572 aaPredicted RBP6.09□□□□□ -1.43
CCDC171-207ENST00000478913 MYADML2A6NDP7 307 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 E7ENX8 843 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 APAF1O14727 1248 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 PLIN1O60240 522 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 ZNF202O95125 648 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 SPDEFO95238 335 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 TNFRSF1AP19438 455 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 FDXRP22570 491 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 SLC11A2P49281 568 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 VAV2P52735 878 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 TAP2Q03519 686 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 TP53BP2Q13625 1128 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 DYRK1AQ13627 763 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 CD300EQ496F6 205 aaPredicted RBP6.09□□□□□ -1.43
CCDC171-207ENST00000478913 TAF2Q6P1X5 1199 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 MRGPREQ86SM8 312 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 ARHGEF19Q8IW93 802 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 MPP5Q8N3R9 675 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 POC1BQ8TC44 478 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 SNX19Q92543 992 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 LRIG1Q96JA1 1093 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 SPATA5L1Q9BVQ7 753 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 TTYH3Q9C0H2 523 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 BTBD1Q9H0C5 482 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 SACM1LQ9NTJ5 587 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 ANKFY1Q9P2R3 1169 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 DKK2Q9UBU2 259 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 HESX1Q9UBX0 185 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 RAD54BQ9Y620 910 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 HS3ST4Q9Y661 456 aa6.09□□□□□ -1.43
CCDC171-207ENST00000478913 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 PI4K2BG5E9Z4 385 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 PMM2O15305 246 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 SOAT2O75908 522 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 ADH4P08319 380 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 ZKSCAN1P17029 563 aaPredicted RBP6.08□□□□□ -1.44
CCDC171-207ENST00000478913 RPL17P18621 184 aaKnown RBP6.08□□□□□ -1.44
CCDC171-207ENST00000478913 ITGALP20701 1170 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 TM4SF4P48230 202 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 UCP3P55916 312 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 CTBP1Q13363 440 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 ITPK1Q13572 414 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 PTPAQ15257 358 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 LONRF3Q496Y0 759 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 CRIP3Q6Q6R5 217 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 DGLUCYQ7Z3D6 616 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 ADGRG5Q8IZF4 528 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 KRT78Q8N1N4 520 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 SLC15A4Q8N697 577 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 SLC46A1Q96NT5 459 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 MOGAT1Q96PD6 335 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 HEPHQ9BQS7 1158 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 MLST8Q9BVC4 326 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 TMPRSS5Q9H3S3 457 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 UNKLQ9H9P5 680 aaKnown RBP6.08□□□□□ -1.44
CCDC171-207ENST00000478913 ADARB2Q9NS39 739 aaKnown RBP6.08□□□□□ -1.44
CCDC171-207ENST00000478913 XPR1Q9UBH6 696 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 TESQ9UGI8 421 aaKnown RBP6.08□□□□□ -1.44
CCDC171-207ENST00000478913 AFF4Q9UHB7 1163 aaKnown RBP6.08□□□□□ -1.44
CCDC171-207ENST00000478913 SNX13Q9Y5W8 968 aa6.08□□□□□ -1.44
CCDC171-207ENST00000478913 PTPRZ1P23471 2315 aaPredicted RBP6.08□□□□□ -1.44
CCDC171-207ENST00000478913 COL15A1P39059 1388 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 UBR3Q6ZT12 1888 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 A0A087WWL8 130 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 RHPN2P1A8MT19 583 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 NARSO43776 548 aaKnown RBP6.07□□□□□ -1.44
CCDC171-207ENST00000478913 ATXN1LP0C7T5 689 aaKnown RBP6.07□□□□□ -1.44
CCDC171-207ENST00000478913 C6P13671 934 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 TACR2P21452 398 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 MCM7P33993 719 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 VIPR2P41587 438 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 NPTX2P47972 431 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
CCDC171-207ENST00000478913 NDUFV1P49821 464 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 FMO1Q01740 532 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 SATB1Q01826 763 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 PRKG1Q13976 671 aa6.07□□□□□ -1.44
CCDC171-207ENST00000478913 HLXQ14774 488 aaPredicted RBP6.07□□□□□ -1.44
CCDC171-207ENST00000478913 IQCB1Q15051 598 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms