RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 GAD2Q05329 585 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 LINC00303Q3SY05 128 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 ATG14Q6ZNE5 492 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 METTL23Q86XA0 190 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 BBS7Q8IWZ6 715 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 KCNE4Q8WWG9 221 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 P2RY11Q96G91 374 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 DRC1Q96MC2 740 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 GTF3C4Q9UKN8 822 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 DSEQ9UL01 958 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
HDAC8-217ENST00000478743 CREBBPQ92793 2442 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 A0A1B0GTQ1 180 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 CLEC18AA5D8T8 446 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 K7ENP7 123 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 OAS1P00973 400 aaKnown RBP13.09□□□□□ -0.31
HDAC8-217ENST00000478743 ADRB2P07550 413 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 RPA1P27694 616 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 EVCP57679 992 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 STK3Q13188 491 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-217ENST00000478743 KRT32Q14532 448 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
HDAC8-217ENST00000478743 INO80CQ6PI98 192 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-217ENST00000478743 CLEC18BQ6UXF7 455 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 EID2Q8N6I1 236 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 DCBLD1Q8N8Z6 715 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 CLEC18CQ8NCF0 446 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 ORAI3Q9BRQ5 295 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
HDAC8-217ENST00000478743 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-217ENST00000478743 CLCA2Q9UQC9 943 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 MAN2B2Q9Y2E5 1009 aa13.09□□□□□ -0.31
HDAC8-217ENST00000478743 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 ENO4A6NNW6 628 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 SLC9A3R1O14745 358 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-217ENST00000478743 CLDN3O15551 220 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 ZBTB24O43167 697 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-217ENST00000478743 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
HDAC8-217ENST00000478743 ITGB6P18564 788 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.32
HDAC8-217ENST00000478743 GRIA4P48058 902 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 TAF6P49848 677 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 TSPY1Q01534 308 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 ANO4Q32M45 955 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 GRAMD4Q6IC98 578 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 BLOC1S2Q6QNY1 142 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 METTL3Q86U44 580 aaKnown RBP13.08□□□□□ -0.32
HDAC8-217ENST00000478743 FBXL16Q8N461 479 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 PDCL2Q8N4E4 241 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 PSMG3-AS1Q96PY0 264 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 CCSER1Q9C0I3 900 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 STARD5Q9NSY2 213 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 LRWD1Q9UFC0 647 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 L1RE1Q9UN81 338 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-217ENST00000478743 STON1Q9Y6Q2 735 aa13.08□□□□□ -0.32
HDAC8-217ENST00000478743 TLN1Q9Y490 2541 aaKnown RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 ARID1BQ8NFD5 2236 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 XPOTO43592 962 aaKnown RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 ATP2C2O75185 946 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 IGLV3-19P01714 112 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 MAPTP10636 758 aaKnown RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 MBL2P11226 248 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 ACSL1P33121 698 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 COPAP53621 1224 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 TLE1Q04724 770 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 NFE2Q16621 373 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 BTBD8Q5XKL5 378 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 RFFLQ8WZ73 363 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 VCPIP1Q96JH7 1222 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 ZNF578Q96N58 590 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 RPF1Q9H9Y2 349 aaKnown RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 ASCL3Q9NQ33 180 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 SPHK2Q9NRA0 654 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 DDX43Q9NXZ2 648 aaKnown RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 TRPM5Q9NZQ8 1165 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
HDAC8-217ENST00000478743 SPENQ96T58 3664 aaKnown RBP13.07□□□□□ -0.32
HDAC8-217ENST00000478743 BLACEA4D250 179 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 ABL1P00519 1130 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 WNT1P04628 370 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 C1SP09871 688 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 GABREP78334 506 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 TMEM132DQ14C87 1099 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 INAVAQ3KP66 663 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 ZPBP2Q6X784 338 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 FAM177A1Q8N128 213 aaPredicted RBP13.06□□□□□ -0.32
HDAC8-217ENST00000478743 KIAA1958Q8N8K9 716 aa13.06□□□□□ -0.32
HDAC8-217ENST00000478743 SAP25Q8TEE9 199 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms