RNA–Protein interactions for RNA: ENST00000478677.1

AGRN-207, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 276 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-207ENST00000478677 CKAP5Q14008 2032 aa12.87□□□□□ -0.35
AGRN-207ENST00000478677 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
AGRN-207ENST00000478677 BSNQ9UPA5 3926 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 C10orf142B7Z368 130 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 CACNG3O60359 315 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 CFIP05156 583 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 MAOBP27338 520 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 RPL6Q02878 288 aaKnown RBP12.86□□□□□ -0.35
AGRN-207ENST00000478677 EHHADHQ08426 723 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 GRIK2Q13002 908 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 NR1H3Q13133 447 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 EOGTQ5NDL2 527 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 MCTP1Q6DN14 999 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 FAM173BQ6P4H8 233 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 GPRIN1Q7Z2K8 1008 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 TRAPPC11Q7Z392 1133 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 ZNF513Q8N8E2 541 aaPredicted RBP12.86□□□□□ -0.35
AGRN-207ENST00000478677 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 DNASE2BQ8WZ79 361 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 CDK5RAP3Q96JB5 506 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 HSPA12BQ96MM6 686 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 GTPBP2Q9BX10 602 aaKnown RBP12.86□□□□□ -0.35
AGRN-207ENST00000478677 RAXQ9Y2V3 346 aa12.86□□□□□ -0.35
AGRN-207ENST00000478677 TMEM131Q92545 1883 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 A0A1W2PQD8 194 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 HHLA1C9JL84 531 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 TBX18O95935 607 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 APODP05090 189 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 KRT19P08727 400 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 PTPN1P18031 435 aaKnown RBP12.85□□□□□ -0.35
AGRN-207ENST00000478677 GRIK1P39086 918 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 POSTNQ15063 836 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 TRIP6Q15654 476 aaKnown RBP12.85□□□□□ -0.35
AGRN-207ENST00000478677 E2F4Q16254 413 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 ZNF423Q2M1K9 1284 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 Q6ZNB5 142 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 NAXDQ8IW45 347 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 GPD1LQ8N335 351 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 FSIP1Q8NA03 581 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 IPO4Q8TEX9 1081 aaKnown RBP12.85□□□□□ -0.35
AGRN-207ENST00000478677 CALML4Q96GE6 196 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 ACCSQ96QU6 501 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 SMOQ99835 787 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 KLF16Q9BXK1 252 aaPredicted RBP12.85□□□□□ -0.35
AGRN-207ENST00000478677 MKRN2Q9H000 416 aaKnown RBP12.85□□□□□ -0.35
AGRN-207ENST00000478677 SPHK2Q9NRA0 654 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 GMIPQ9P107 970 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 USP36Q9P275 1121 aaKnown RBP12.85□□□□□ -0.35
AGRN-207ENST00000478677 SEL1LQ9UBV2 794 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 CYP8B1Q9UNU6 501 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 BTBD3Q9Y2F9 522 aa12.85□□□□□ -0.35
AGRN-207ENST00000478677 FNDC3AQ9Y2H6 1198 aaKnown RBP12.85□□□□□ -0.35
AGRN-207ENST00000478677 H0Y626 953 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 OPHN1O60890 802 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 ALDH1A2O94788 518 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 TRIM16O95361 564 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 HOXB2P14652 356 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 C10orf76Q5T2E6 689 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 SPACA7Q96KW9 195 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 SLC32A1Q9H598 525 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 MRPL44Q9H9J2 332 aaKnown RBP12.84□□□□□ -0.35
AGRN-207ENST00000478677 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 POLMQ9NP87 494 aaPredicted RBP12.84□□□□□ -0.35
AGRN-207ENST00000478677 DKK4Q9UBT3 224 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 CHORDC1Q9UHD1 332 aaPredicted RBP12.84□□□□□ -0.35
AGRN-207ENST00000478677 CLEC4EQ9ULY5 219 aa12.84□□□□□ -0.35
AGRN-207ENST00000478677 NUMA1Q14980 2115 aa12.83□□□□□ -0.35
AGRN-207ENST00000478677 TRIM66O15016 1216 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 AP5Z1O43299 807 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 GCNT3O95395 438 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 VNN1O95497 513 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 STAU1O95793 577 aaKnown RBP12.83□□□□□ -0.36
AGRN-207ENST00000478677 ADH1CP00326 375 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 IGLV3-19P01714 112 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 KLKB1P03952 638 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 KRT18P05783 430 aaKnown RBP12.83□□□□□ -0.36
AGRN-207ENST00000478677 MBL2P11226 248 aaPredicted RBP12.83□□□□□ -0.36
AGRN-207ENST00000478677 NTSR1P30989 418 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 ABCD1P33897 745 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 PPP3CCP48454 512 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 TUBP50607 506 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 COPAP53621 1224 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 SLC5A3P53794 718 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 CDH8P55286 799 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 MYL6P60660 151 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 GAD2Q05329 585 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 GFPT1Q06210 699 aaPredicted RBP12.83□□□□□ -0.36
AGRN-207ENST00000478677 SLC14A1Q13336 389 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 KCNT1Q5JUK3 1230 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 TMEM215Q68D42 235 aa12.83□□□□□ -0.36
AGRN-207ENST00000478677 HTR3DQ70Z44 454 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms