RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 RPL6Q02878 288 aaKnown RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 ZNF33AQ06730 810 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 IFRD2Q12894 506 aaPredicted RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 COL9A2Q14055 689 aaPredicted RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 SNRNP35Q16560 246 aaKnown RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 HECTD3Q5T447 861 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 KIAA1211LQ6NV74 962 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 LRSAM1Q6UWE0 723 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 B3GALNT2Q8NCR0 500 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 FBXO32Q969P5 355 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 ZFRQ96KR1 1074 aaKnown RBP10.25□□□□□ -0.77
CCM2-210ENST00000478169 CGRRF1Q99675 332 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 B3GNT5Q9BYG0 378 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 PANK2Q9BZ23 570 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 ZNF518BQ9C0D4 1074 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 DPEP3Q9H4B8 488 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 SPHK2Q9NRA0 654 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 COMMD8Q9NX08 183 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 IL37Q9NZH6 218 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 ATP8B3O60423 1300 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 ADAMTS20P59510 1910 aa10.25□□□□□ -0.77
CCM2-210ENST00000478169 ACACAQ13085 2346 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 KNL1Q8NG31 2342 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 A0A087X0B3 334 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 SPAARA0A1B0GVQ0 90 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 FAM92AA1XBS5 289 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ZNF217O75362 1048 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 SYPP08247 313 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ZDHHC11BP0C7U3 371 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 HOXB2P14652 356 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 NTSR1P30989 418 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ATICP31939 592 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 HOXD13P35453 343 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 CYP24A1Q07973 514 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 SLC14A1Q13336 389 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 TRPC3Q13507 836 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 PSMD6Q15008 389 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 SLC39A14Q15043 492 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ZNF423Q2M1K9 1284 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ANO4Q32M45 955 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 C10orf76Q5T2E6 689 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 EPM2AIP1Q7L775 607 aaPredicted RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 NAT16Q8N8M0 369 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 TERB1Q8NA31 727 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 RDH13Q8NBN7 331 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 GLIS3Q8NEA6 775 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ZNF507Q8TCN5 953 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 SYAP1Q96A49 352 aaPredicted RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 KCNK16Q96T55 309 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 GTPBP2Q9BX10 602 aaKnown RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 TNMDQ9H2S6 317 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 UPF2Q9HAU5 1272 aaKnown RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 ZDHHC4Q9NPG8 344 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 DNAAF2Q9NVR5 837 aaKnown RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 CALCOCO1Q9P1Z2 691 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 CHORDC1Q9UHD1 332 aaPredicted RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 KLK13Q9UKR3 277 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 PLXNB3Q9ULL4 1909 aa10.24□□□□□ -0.77
CCM2-210ENST00000478169 ATXN2Q99700 1313 aaKnown RBP10.24□□□□□ -0.77
CCM2-210ENST00000478169 CABIN1Q9Y6J0 2220 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 PTPRBP23467 1997 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 A0A1W2PQD8 194 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 A0A1W2PQF6 199 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 CLDN5O00501 218 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 TGFB1I1O43294 461 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 MYL6P60660 151 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 AMPD3Q01432 767 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 CUL4AQ13619 759 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 GRAMD4Q6IC98 578 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 SDE2Q6IQ49 451 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 CNNM4Q6P4Q7 775 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 HTR3DQ70Z44 454 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 FAM35AQ86V20 835 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 TMEM25Q86YD3 366 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 BBS7Q8IWZ6 715 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 MINDY1Q8N5J2 469 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 PDILTQ8N807 584 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 SCAMP5Q8TAC9 235 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 CCDC127Q96BQ5 260 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 SMARCD1Q96GM5 515 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 TNIP3Q96KP6 325 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 XPO6Q96QU8 1125 aaKnown RBP10.23□□□□□ -0.77
CCM2-210ENST00000478169 TRIM9Q9C026 710 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 XYLT2Q9H1B5 865 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 CUEDC2Q9H467 287 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 FAM124BQ9H5Z6 455 aaPredicted RBP10.23□□□□□ -0.77
CCM2-210ENST00000478169 CCSER2Q9H7U1 834 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 VRTNQ9H8Y1 702 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 CD248Q9HCU0 757 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 DMAP1Q9NPF5 467 aaPredicted RBP10.23□□□□□ -0.77
CCM2-210ENST00000478169 KBTBD4Q9NVX7 518 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 CGNQ9P2M7 1197 aaKnown RBP10.23□□□□□ -0.77
CCM2-210ENST00000478169 NXF1Q9UBU9 619 aaKnown RBP10.23□□□□□ -0.77
CCM2-210ENST00000478169 HCN2Q9UL51 889 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 UBE4BO95155 1302 aa10.23□□□□□ -0.77
CCM2-210ENST00000478169 GOLGA4Q13439 2230 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms