RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MBL2P11226 248 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-222ENST00000478095 PSMC3P17980 439 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 GDI1P31150 447 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 PPP3CCP48454 512 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 FANCCQ00597 558 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 PTK2Q05397 1052 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 SIGLEC14Q08ET2 396 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 RAB41Q5JT25 222 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 HECTD3Q5T447 861 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 TAF3Q5VWG9 929 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 TRIM67Q6ZTA4 783 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 MFSD6LQ8IWD5 586 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 YAF2Q8IY57 180 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 SIX6OS1Q8N1H7 587 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 CELF5Q8N6W0 485 aaKnown RBP10.81□□□□□ -0.68
HDAC6-222ENST00000478095 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 DEPDC1BQ8WUY9 529 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 SLC35F5Q8WV83 523 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 ZFYVE19Q96K21 471 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 ERGIC2Q96RQ1 377 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 TRMT61BQ9BVS5 477 aaKnown RBP10.81□□□□□ -0.68
HDAC6-222ENST00000478095 STK33Q9BYT3 514 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 UBXN6Q9BZV1 441 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 NACA2Q9H009 215 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 BRD9Q9H8M2 597 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 ST7Q9NRC1 585 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 TDP1Q9NUW8 608 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 NAGPAQ9UK23 515 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 NUDT5Q9UKK9 219 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 FBXL21Q9UKT6 434 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 CA14Q9ULX7 337 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 CPQQ9Y646 472 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 USP3Q9Y6I4 520 aa10.81□□□□□ -0.68
HDAC6-222ENST00000478095 TMEM221A6NGB7 291 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 M0R296 226 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 ZNF263O14978 683 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 MDM4O15151 490 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 TLR5O60602 858 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 OLFM2O95897 454 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 TBX18O95935 607 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 ZBED1O96006 694 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 PDGFBP01127 241 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-222ENST00000478095 CYP11B1P15538 503 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 GPD2P43304 727 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 JAM2P57087 298 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 ZXDBP98169 803 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 CCDC186Q7Z3E2 898 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 SCD5Q86SK9 330 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 SIX5Q8N196 739 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 C1orf131Q8NDD1 294 aaKnown RBP10.8□□□□□ -0.68
HDAC6-222ENST00000478095 TTC8Q8TAM2 541 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 SH3RF2Q8TEC5 729 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 CLEC4CQ8WTT0 213 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 E2F7Q96AV8 911 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 ASIC4Q96FT7 647 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 MIS12Q9H081 205 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 C11orf16Q9NQ32 467 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 SLC2A4RGQ9NR83 387 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 TLR8Q9NR97 1041 aaKnown RBP10.8□□□□□ -0.68
HDAC6-222ENST00000478095 CYTH4Q9UIA0 394 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 ZMYM5Q9UJ78 669 aa10.8□□□□□ -0.68
HDAC6-222ENST00000478095 KRBA1A5PL33 1030 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 LEFTY2O00292 366 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 IRF1P10914 325 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 RARGP13631 454 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 WEE1P30291 646 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 KRT9P35527 623 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 SOX5P35711 763 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 STAT1P42224 750 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 PDE6CP51160 858 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 UBASH3AP57075 661 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 BPIFB4P59827 614 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 ZNF445P59923 1031 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 YWHAGP61981 247 aaKnown RBP eCLIP10.79□□□□□ -0.68
HDAC6-222ENST00000478095 SLC7A9P82251 487 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 ARID5AQ03989 594 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 TNK2Q07912 1038 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 FCHO2Q0JRZ9 810 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 USP4Q13107 963 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 ZNF268Q14587 947 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-222ENST00000478095 MTF1Q14872 753 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 ZNF77Q15935 545 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 SNX30Q5VWJ9 437 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 TRIM68Q6AZZ1 485 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 BHLHA9Q7RTU4 235 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 CACNA2D4Q7Z3S7 1137 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 NOP9Q86U38 636 aaKnown RBP10.79□□□□□ -0.68
HDAC6-222ENST00000478095 SLC20A1Q8WUM9 679 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 KCTD13Q8WZ19 329 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 PDCL3Q9H2J4 239 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 KIF9Q9HAQ2 790 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 ARHGEF3Q9NR81 526 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 HEBP1Q9NRV9 189 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 OBP2AQ9NY56 170 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 IFNKQ9P0W0 207 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 ARHGAP26Q9UNA1 814 aa10.79□□□□□ -0.68
HDAC6-222ENST00000478095 WNT6Q9Y6F9 365 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms