RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 USP22Q9UPT9 525 aa4.12□□□□□ -1.75
NCKAP1-204ENST00000477988 ACOT8O14734 319 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 SPTLC2O15270 562 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 SYF2O95926 243 aaKnown RBP4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 POU2F2P09086 479 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 YPEL5P62699 121 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 INPP5JQ15735 1006 aaPredicted RBP4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 FAM110CQ1W6H9 321 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 EARS2Q5JPH6 523 aaKnown RBP4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 CC2D1BQ5T0F9 858 aaKnown RBP4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 GFI1BQ5VTD9 330 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 ZNF324BQ6AW86 544 aaPredicted RBP4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 BPIFB1Q8TDL5 484 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 TMEM171Q8WVE6 324 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 DNASE2BQ8WZ79 361 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 HIC2Q96JB3 615 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 ZSCAN32Q9NX65 697 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 LPAR3Q9UBY5 353 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 ATP8A1Q9Y2Q0 1164 aa4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
NCKAP1-204ENST00000477988 A0A087WWL8 130 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 NTN3O00634 580 aaPredicted RBP4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 CREB1P16220 341 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 CCND1P24385 295 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 TBXAS1P24557 533 aaPredicted RBP4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 EPHA3P29320 983 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 PRKAR1BP31321 381 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 ALDH7A1P49419 539 aaKnown RBP4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 GUCY2FP51841 1108 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 PTPN21Q16825 1174 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 PRTGQ2VWP7 1150 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 ZNF793Q6ZN11 406 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 SPARTQ8N0X7 666 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 NGDNQ8NEJ9 315 aaKnown RBP4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 GBA2Q9HCG7 927 aaPredicted RBP4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 CNNM1Q9NRU3 951 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 DECR2Q9NUI1 292 aa4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 TRIP12Q14669 1992 aaPredicted RBP4.1□□□□□ -1.75
NCKAP1-204ENST00000477988 CLIC1O00299 241 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 CTIFO43310 598 aaKnown RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 SPRY2O43597 315 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 TNFRSF8P28908 595 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 RECQLP46063 649 aaPredicted RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 PFKFB3Q16875 520 aaPredicted RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 PLA1AQ53H76 456 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 LMBRD2Q68DH5 695 aaPredicted RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 B4GALNT4Q76KP1 1039 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 TMPRSS12Q86WS5 348 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 DNAJC5GQ8N7S2 189 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 C12orf76Q8N812 135 aaPredicted RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 NTPCRQ9BSD7 190 aaKnown RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 ARHGAP39Q9C0H5 1083 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 CCDC8Q9H0W5 538 aaPredicted RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 PIH1D1Q9NWS0 290 aaKnown RBP4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 SPEF1Q9Y4P9 236 aa4.09□□□□□ -1.75
NCKAP1-204ENST00000477988 IFITM10A6NMD0 228 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 INPPL1O15357 1258 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 AKAP10O43572 662 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 TLX3O43711 291 aaPredicted RBP4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 USP12O75317 370 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 EPN2O95208 641 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 TNKSO95271 1327 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 IGKV3-20P01619 116 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 FGF3P11487 239 aaPredicted RBP4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 PLA2G2AP14555 144 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 TIRAPP58753 221 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 HILS1P60008 231 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 SLC14A1Q13336 389 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 MFSD13AQ14CX5 517 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 CUZD1Q86UP6 607 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 COL23A1Q86Y22 540 aaPredicted RBP4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 SLC15A4Q8N697 577 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 IQCF1Q8N6M8 205 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 MTMR8Q96EF0 704 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 KAZALD1Q96I82 304 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 MRGPRX1Q96LB2 322 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 TUBB6Q9BUF5 446 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 TRIM5Q9C035 493 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 TMEM45AQ9NWC5 275 aa4.08□□□□□ -1.76
NCKAP1-204ENST00000477988 C2CD4BA6NLJ0 364 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 ZNF814B7Z6K7 855 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 MTHFSP49914 203 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 PTCHD3Q3KNS1 767 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 RFX8Q6ZV50 586 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 FAM57BQ71RH2 274 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 ASB5Q8WWX0 329 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 JPH3Q8WXH2 748 aaPredicted RBP4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 ATP2A3Q93084 1043 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 EDC3Q96F86 508 aaKnown RBP4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 XPNPEP3Q9NQH7 507 aa4.07□□□□□ -1.76
NCKAP1-204ENST00000477988 UQCRC1P31930 480 aa4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 TIAL1Q01085 375 aaKnown RBP eCLIP4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 SPATA2LQ8IUW3 424 aaPredicted RBP4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 FBXL14Q8N1E6 418 aa4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 CELF5Q8N6W0 485 aaKnown RBP4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 KBTBD7Q8WVZ9 684 aa4.06□□□□□ -1.76
NCKAP1-204ENST00000477988 MVB12AQ96EY5 273 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms