RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 OSTNP61366 133 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 INCA1Q0VD86 236 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 BLMHQ13867 455 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 C4orf50Q6ZRC1 276 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 CYP4V2Q6ZWL3 525 aaPredicted RBP18.82■□□□□ 0.6
CCM2-209ENST00000477605 LRRC6Q86X45 466 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 MCUQ8NE86 351 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCM2-209ENST00000477605 AFG1LQ8WV93 481 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 MTBPQ96DY7 904 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 TWNKQ96RR1 684 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 KLF6Q99612 283 aaPredicted RBP18.82■□□□□ 0.6
CCM2-209ENST00000477605 SPATC1LQ9H0A9 340 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 SMARCAD1Q9H4L7 1026 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 BARX2Q9UMQ3 279 aaPredicted RBP18.82■□□□□ 0.6
CCM2-209ENST00000477605 A0A0G2JND7 137 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 LACTBL1A8MY62 500 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 COPEO14579 308 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 NFICP08651 508 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 NEFHP12036 1026 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 PDGFRAP16234 1089 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 GM2AP17900 193 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 PRAMEF18Q5VWM3 479 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 LCLAT1Q6UWP7 414 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 CEP120Q8N960 986 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 RAB3IL1Q8TBN0 382 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 RXFP2Q8WXD0 754 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 HEXIM2Q96MH2 286 aaKnown RBP18.81■□□□□ 0.6
CCM2-209ENST00000477605 NLRP4Q96MN2 994 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 FAM111AQ96PZ2 611 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 TMEM120AQ9BXJ8 343 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 IQCGQ9H095 443 aaKnown RBP18.81■□□□□ 0.6
CCM2-209ENST00000477605 KLC2Q9H0B6 622 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 B4GALT5O43286 388 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 C1QAP02745 245 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 ITGB3P05106 788 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 STAG3L1P0CL83 205 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 PYGBP11216 843 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 DESP17661 470 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 ZBTB16Q05516 673 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 OVGP1Q12889 678 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 KRT81Q14533 505 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 ZC3H18Q86VM9 953 aaKnown RBP18.81■□□□□ 0.6
CCM2-209ENST00000477605 PLD5Q8N7P1 536 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 C7orf26Q96N11 449 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 CADM1Q9BY67 442 aaKnown RBP18.81■□□□□ 0.6
CCM2-209ENST00000477605 RAB6BQ9NRW1 208 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 KCNK4Q9NYG8 393 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 STOML1Q9UBI4 398 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 CORO1CQ9ULV4 474 aaPredicted RBP18.81■□□□□ 0.6
CCM2-209ENST00000477605 TTLL3Q9Y4R7 772 aa18.81■□□□□ 0.6
CCM2-209ENST00000477605 APOL1O14791 398 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 GSC2O15499 205 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 CCNFP41002 786 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 PHKA2P46019 1235 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 HIRAP54198 1017 aaPredicted RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 YWHAZP63104 245 aaKnown RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 MMRN1Q13201 1228 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 ATG16L1Q676U5 607 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 JADE1Q6IE81 842 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 CCDC62Q6P9F0 684 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 NPNTQ6UXI9 565 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 PAXIP1Q6ZW49 1069 aaPredicted RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 NCAPG2Q86XI2 1143 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 IFNLR1Q8IU57 520 aaPredicted RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 TAB3Q8N5C8 712 aaPredicted RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 MIPEPQ99797 713 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 IFT122Q9HBG6 1241 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 ARL8BQ9NVJ2 186 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 GPR25O00155 361 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 ATP6V1C1P21283 382 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 OSBPP22059 807 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 SNX16P57768 344 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 TSNAXIP1Q2TAA8 658 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 HSDL1Q3SXM5 330 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 SLC9A4Q6AI14 798 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 EFCAB12Q6NXP0 572 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 NT5DC4Q86YG4 428 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 ARHGAP24Q8N264 748 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 TTC17Q96AE7 1141 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 SRPK1Q96SB4 655 aaKnown RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 TRIM6Q9C030 488 aaPredicted RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 GBA2Q9HCG7 927 aaPredicted RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 ZC3H7BQ9UGR2 993 aaKnown RBP18.8■□□□□ 0.6
CCM2-209ENST00000477605 HMGXB4Q9UGU5 601 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 ITGA11Q9UKX5 1188 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 FZD1Q9UP38 647 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 PLLPQ9Y342 182 aa18.8■□□□□ 0.6
CCM2-209ENST00000477605 TRIM49D1C9J1S8 452 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 I3L4J1 428 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 GYG2O15488 501 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 SLC25A27O95847 323 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 SETSIPP0DME0 302 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 ACADSP16219 412 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 BGNP21810 368 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 BCAR1P56945 870 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 HTRA3P83110 453 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 OR6B2Q6IFH4 312 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 LMNTD2Q8IXW0 634 aa18.79■□□□□ 0.6
CCM2-209ENST00000477605 OXNAD1Q96HP4 312 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms