RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 DLDP09622 509 aaKnown RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 KITP10721 976 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 KCNA3P22001 575 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 IL1R2P27930 398 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 DGKEP52429 567 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 RAB1AP62820 205 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 TRIP6Q15654 476 aaKnown RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 CERKLQ49MI3 558 aaPredicted RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 RNASE12Q5GAN4 147 aaKnown RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 B3GNT9Q6UX72 402 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 TECPR1Q7Z6L1 1165 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 PPP1R35Q8TAP8 253 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 PRR25Q96S07 402 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 MESP1Q9BRJ9 268 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 C17orf80Q9BSJ5 609 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 NMRK2Q9NPI5 230 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 PIH1D1Q9NWS0 290 aaKnown RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 TRNAU1APQ9NX07 287 aaKnown RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 TFCP2L1Q9NZI6 479 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 KLHL42Q9P2K6 505 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 GCC2Q8IWJ2 1684 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 ZMYM4Q5VZL5 1548 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 ZFYVE16Q7Z3T8 1539 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 KIF15Q9NS87 1388 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 KIDINS220Q9ULH0 1771 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 ADGRL2O95490 1459 aa5□□□□□ -1.61
UBR3-209ENST00000477461 MAGI2Q86UL8 1455 aa5□□□□□ -1.61
UBR3-209ENST00000477461 MLH3Q9UHC1 1453 aa5□□□□□ -1.61
UBR3-209ENST00000477461 FRMPD1Q5SYB0 1578 aa5□□□□□ -1.61
UBR3-209ENST00000477461 PTPRKQ15262 1439 aa5□□□□□ -1.61
UBR3-209ENST00000477461 NCOA1Q15788 1441 aa5□□□□□ -1.61
UBR3-209ENST00000477461 SETD5Q9C0A6 1442 aa5□□□□□ -1.61
UBR3-209ENST00000477461 A0A088AWK7 358 aa5□□□□□ -1.61
UBR3-209ENST00000477461 TCRBV5S1A1TA0A578 114 aa5□□□□□ -1.61
UBR3-209ENST00000477461 BTN3A1O00481 513 aa5□□□□□ -1.61
UBR3-209ENST00000477461 CES2O00748 559 aa5□□□□□ -1.61
UBR3-209ENST00000477461 BCAR3O75815 825 aa5□□□□□ -1.61
UBR3-209ENST00000477461 NTN1O95631 604 aa5□□□□□ -1.61
UBR3-209ENST00000477461 THP07101 528 aa5□□□□□ -1.61
UBR3-209ENST00000477461 HMGB1P09429 215 aaKnown RBP5□□□□□ -1.61
UBR3-209ENST00000477461 HSPA6P17066 643 aa5□□□□□ -1.61
UBR3-209ENST00000477461 MGAT5BQ3V5L5 792 aa5□□□□□ -1.61
UBR3-209ENST00000477461 EPM2AIP1Q7L775 607 aaPredicted RBP5□□□□□ -1.61
UBR3-209ENST00000477461 MAGEB6Q8N7X4 407 aa5□□□□□ -1.61
UBR3-209ENST00000477461 SLC35G2Q8TBE7 412 aa5□□□□□ -1.61
UBR3-209ENST00000477461 BPIFB1Q8TDL5 484 aa5□□□□□ -1.61
UBR3-209ENST00000477461 DIS3LQ8TF46 1054 aaKnown RBP5□□□□□ -1.61
UBR3-209ENST00000477461 SNX18Q96RF0 628 aa5□□□□□ -1.61
UBR3-209ENST00000477461 EFHD1Q9BUP0 239 aa5□□□□□ -1.61
UBR3-209ENST00000477461 TRMT13Q9NUP7 481 aaKnown RBP5□□□□□ -1.61
UBR3-209ENST00000477461 G3BP2Q9UN86 482 aaKnown RBP5□□□□□ -1.61
UBR3-209ENST00000477461 MED16Q9Y2X0 877 aa5□□□□□ -1.61
UBR3-209ENST00000477461 DUOX2Q9NRD8 1548 aa5□□□□□ -1.61
UBR3-209ENST00000477461 HFM1A2PYH4 1435 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 ABCA6Q8N139 1617 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 UBE2Q2LH0YL09 131 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 H3BML4 177 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 H7C1Q1 480 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 TRIM38O00635 465 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 FCHO1O14526 889 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 ADAM10O14672 748 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 GCATO75600 419 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 PRKCBP05771 671 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 CYP2C9P11712 490 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 NPR1P16066 1061 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 ATP5F1P24539 256 aaPredicted RBP4.99□□□□□ -1.61
UBR3-209ENST00000477461 HTR1BP28222 390 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 PLCD1P51178 756 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 PSG6Q00889 435 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 ZNF268Q14587 947 aaPredicted RBP4.99□□□□□ -1.61
UBR3-209ENST00000477461 MLC1Q15049 377 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 FAM187BQ17R55 369 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 AWAT1Q58HT5 328 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 LMBRD2Q68DH5 695 aaPredicted RBP4.99□□□□□ -1.61
UBR3-209ENST00000477461 DAAM2Q86T65 1068 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 TPH2Q8IWU9 490 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 HMCESQ96FZ2 354 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 MMS19Q96T76 1030 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 WACQ9BTA9 647 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 GABRQQ9UN88 632 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 SCAF8Q9UPN6 1271 aaKnown RBP4.99□□□□□ -1.61
UBR3-209ENST00000477461 DIP2CQ9Y2E4 1556 aa4.99□□□□□ -1.61
UBR3-209ENST00000477461 ARID4BQ4LE39 1312 aaPredicted RBP4.98□□□□□ -1.61
UBR3-209ENST00000477461 NAIPQ13075 1403 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 ERBINQ96RT1 1412 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 ANKRD50Q9ULJ7 1429 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 YEATS2Q9ULM3 1422 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 ARHGEF40Q8TER5 1519 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 A0A1W2PPL8 197 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 TBC1D4O60343 1298 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 TJP3O95049 919 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 FGAP02671 866 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 XRCC6P12956 609 aaKnown RBP eCLIP4.98□□□□□ -1.61
UBR3-209ENST00000477461 COPB1P53618 953 aaKnown RBP4.98□□□□□ -1.61
UBR3-209ENST00000477461 MINDY4Q4G0A6 757 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 ZNF783Q6ZMS7 281 aa4.98□□□□□ -1.61
UBR3-209ENST00000477461 BCDIN3DQ7Z5W3 292 aaKnown RBP4.98□□□□□ -1.61
UBR3-209ENST00000477461 SIRT6Q8N6T7 355 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms