RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SEMA4GQ9NTN9 838 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 COL4A2P08572 1712 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ANK1P16157 1881 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 NPHP3-ACAD11A0A0J9YXS1 232 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CHURC1-FNTBB4DL54 471 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ARNTLO00327 626 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ENC1O14682 589 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CCDC192P0DO97 292 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 TDGF1P13385 188 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 PFKLP17858 780 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 PLCG1P19174 1290 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 LHX1P48742 406 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 FNTBP49356 437 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ACOT2P49753 483 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 SATB1Q01826 763 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 RUNX3Q13761 415 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ZNF268Q14587 947 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 PON2Q15165 354 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 AASDHQ4L235 1098 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 RRAGBQ5VZM2 374 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 C4orf50Q6ZRC1 276 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CCDC73Q6ZRK6 1079 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 PRR23CQ6ZRP0 262 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 LEO1Q8WVC0 666 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ACDQ96AP0 544 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 CEP295NLQ96MC4 621 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 ACBD6Q9BR61 282 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 TDP1Q9NUW8 608 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 PCDHGA5Q9Y5G8 931 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 STYXL1Q9Y6J8 313 aa7.79□□□□□ -1.16
BRCA1-214ENST00000477152 DENND4CQ5VZ89 1909 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 TRAV19A0A0A6YYK7 116 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 TERTO14746 1132 aaKnown RBP7.78□□□□□ -1.16
BRCA1-214ENST00000477152 RHOBTB1O94844 696 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 NFICP08651 508 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 TMEM191BP0C7N4 346 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 GARTP22102 1010 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 RBP5P82980 135 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 GAREM2Q75VX8 874 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 DPH6Q7L8W6 267 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 ZNF720Q7Z2F6 126 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 SPATA2LQ8IUW3 424 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-214ENST00000477152 LRRC52Q8N7C0 313 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 GAB3Q8WWW8 586 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 ANKRD36BP1Q96IX9 119 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 CHAMP1Q96JM3 812 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 KIAA1586Q9HCI6 787 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 GKN1Q9NS71 199 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 ITGA11Q9UKX5 1188 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 GVINP1Q7Z2Y8 2422 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 TSC2P49815 1807 aa7.78□□□□□ -1.16
BRCA1-214ENST00000477152 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 ADARB2-AS1A8MUL3 147 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 TRDMT1O14717 391 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 RPP40O75818 363 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 SMNDC1O75940 238 aaKnown RBP eCLIP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 GCNT3O95395 438 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 TNNC2P02585 160 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 ANXA13P27216 316 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 NMT1P30419 496 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 PPP3CCP48454 512 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 IFNAR2P48551 515 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 LIMK1P53667 647 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 NLRP12P59046 1061 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 TFAMQ00059 246 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 AMPD3Q01432 767 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 SF3A1Q15459 793 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 ELF2Q15723 593 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 LPAL2Q16609 132 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 ZNF423Q2M1K9 1284 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 PREPLQ4J6C6 727 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 L1TD1Q5T7N2 865 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 HGSNATQ68CP4 663 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 HEATR6Q6AI08 1181 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 TXNDC11Q6PKC3 985 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 VN1R5Q7Z5H4 357 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 MON1AQ86VX9 555 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 CCDC65Q8IXS2 484 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 KIAA1958Q8N8K9 716 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 MAB21L3Q8N8X9 362 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 ATP2A3Q93084 1043 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 TRMT2BQ96GJ1 504 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 FUBP3Q96I24 572 aaKnown RBP eCLIP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 HAPLN2Q9GZV7 340 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 GTSE1Q9NYZ3 720 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 MAGED2Q9UNF1 606 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 KIF26AQ9ULI4 1882 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 EP300Q09472 2414 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 OTOGLQ3ZCN5 2332 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 MEFVO15553 781 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 FAM189A1O60320 539 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 KRT19P08727 400 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 TRIM21P19474 475 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 GUCY2FP51841 1108 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 CYP4F8P98187 520 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 FAM160A1Q05DH4 1040 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 KCNB1Q14721 858 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms