RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 C8orf33Q9H7E9 229 aaPredicted RBP12.94□□□□□ -0.34
PRKD3-209ENST00000477132 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
PRKD3-209ENST00000477132 SAMSN1Q9NSI8 373 aaKnown RBP12.94□□□□□ -0.34
PRKD3-209ENST00000477132 RBM12Q9NTZ6 932 aaKnown RBP12.94□□□□□ -0.34
PRKD3-209ENST00000477132 DUS2Q9NX74 493 aaKnown RBP12.94□□□□□ -0.34
PRKD3-209ENST00000477132 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
PRKD3-209ENST00000477132 NUDT5Q9UKK9 219 aa12.94□□□□□ -0.34
PRKD3-209ENST00000477132 ATG2BQ96BY7 2078 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 A0A1W2PQH9 124 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 MDM4O15151 490 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 TLR5O60602 858 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 TBX18O95935 607 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 PAEPP09466 180 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 VDRP11473 427 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 BRD2P25440 801 aaKnown RBP12.93□□□□□ -0.34
PRKD3-209ENST00000477132 IFNAR2P48551 515 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 GAS6Q14393 721 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 PDGFRLQ15198 375 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 MAN2A1Q16706 1144 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 TPD52L1Q16890 204 aaPredicted RBP12.93□□□□□ -0.34
PRKD3-209ENST00000477132 GAB4Q2WGN9 574 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 PKDCCQ504Y2 493 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 RAB41Q5JT25 222 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 BHLHA9Q7RTU4 235 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 CCDC186Q7Z3E2 898 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 UBA3Q8TBC4 463 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 MSANTD3Q96H12 275 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 NELL2Q99435 816 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 ECT2Q9H8V3 914 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 SIX2Q9NPC8 291 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 CYLDQ9NQC7 956 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 TLR8Q9NR97 1041 aaKnown RBP12.93□□□□□ -0.34
PRKD3-209ENST00000477132 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 CFAP97Q9P2B7 532 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 CNTN6Q9UQ52 1028 aa12.93□□□□□ -0.34
PRKD3-209ENST00000477132 MRPS17Q9Y2R5 130 aaKnown RBP12.93□□□□□ -0.34
PRKD3-209ENST00000477132 BECN2A8MW95 431 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 XPO1O14980 1071 aaKnown RBP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 MBD3O95983 291 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 PON1P27169 355 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 GJA4P35212 333 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 RPS9P46781 194 aaKnown RBP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 BCAT1P54687 386 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 MTAPQ13126 283 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 DPY19L2P1Q6NXN4 242 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 Q6ZS52 159 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 C1orf210Q8IVY1 113 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 NDRG1Q92597 394 aaKnown RBP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 ATOH1Q92858 354 aaPredicted RBP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 CHRDQ9H2X0 955 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 LMAN1LQ9HAT1 526 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 FBRSL1Q9HCM7 1045 aaKnown RBP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 UBE2TQ9NPD8 197 aaPredicted RBP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 SPATA6Q9NWH7 488 aaPredicted RBP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.92□□□□□ -0.34
PRKD3-209ENST00000477132 NFE2L3Q9Y4A8 694 aa12.92□□□□□ -0.34
PRKD3-209ENST00000477132 GTPBP10A4D1E9 387 aaKnown RBP12.91□□□□□ -0.34
PRKD3-209ENST00000477132 KCNJ18B7U540 433 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 GREM1O60565 184 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 CYP17A1P05093 508 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 IRF1P10914 325 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 RARGP13631 454 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 TKTL1P51854 596 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 ADIGQ0VDE8 80 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 BST2Q10589 180 aaKnown RBP12.91□□□□□ -0.34
PRKD3-209ENST00000477132 CCINQ13939 588 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 KCNJ12Q14500 433 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 VWA3BQ502W6 1294 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 CCDC183Q5T5S1 534 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 FSTL4Q6MZW2 842 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 LCLAT1Q6UWP7 414 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 FAM114A1Q8IWE2 563 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 CPA6Q8N4T0 437 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 ENOX1Q8TC92 643 aaKnown RBP12.91□□□□□ -0.34
PRKD3-209ENST00000477132 EZH1Q92800 747 aaPredicted RBP12.91□□□□□ -0.34
PRKD3-209ENST00000477132 SECISBP2LQ93073 1101 aaKnown RBP12.91□□□□□ -0.34
PRKD3-209ENST00000477132 ATP2A3Q93084 1043 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 TUBGCP2Q9BSJ2 902 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 KLF16Q9BXK1 252 aaPredicted RBP12.91□□□□□ -0.34
PRKD3-209ENST00000477132 ULBP1Q9BZM6 244 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 UBXN6Q9BZV1 441 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 NDST4Q9H3R1 872 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 C2orf42Q9NWW7 574 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 APEX2Q9UBZ4 518 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 NAGPAQ9UK23 515 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 MYO15AQ9UKN7 3530 aa12.91□□□□□ -0.34
PRKD3-209ENST00000477132 ANTXRLA6NF34 631 aa12.9□□□□□ -0.34
PRKD3-209ENST00000477132 M0QYV0 167 aa12.9□□□□□ -0.34
PRKD3-209ENST00000477132 PIK3R2O00459 728 aa12.9□□□□□ -0.34
PRKD3-209ENST00000477132 TRDMT1O14717 391 aaKnown RBP12.9□□□□□ -0.34
PRKD3-209ENST00000477132 NCAM2O15394 837 aa12.9□□□□□ -0.34
PRKD3-209ENST00000477132 SP9P0CG40 484 aa12.9□□□□□ -0.34
PRKD3-209ENST00000477132 KRT5P13647 590 aa12.9□□□□□ -0.34
PRKD3-209ENST00000477132 PRKCSHP14314 528 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms