RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 PER3P56645 1201 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 GEMIN4P57678 1058 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 INHBEP58166 350 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 SPARCL1Q14515 664 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 TEDDM1Q5T9Z0 273 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 C1orf146Q5VVC0 180 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 SARM1Q6SZW1 724 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 RASSF6Q6ZTQ3 369 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 EPM2AIP1Q7L775 607 aaPredicted RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 LGI2Q8N0V4 545 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 C17orf53Q8N3J3 647 aaPredicted RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 C1orf54Q8WWF1 131 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 CNDP1Q96KN2 507 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 CNPY3Q9BT09 278 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 DNAJC5Q9H3Z4 198 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 HAUS4Q9H6D7 363 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 LRRC4BQ9NT99 713 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 DDX28Q9NUL7 540 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 CLIC5Q9NZA1 410 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 SNX24Q9Y343 169 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 MCIDASD6RGH6 385 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 TBC1D4O60343 1298 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 ERVK-21P61565 698 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 MTM1Q13496 603 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 TRIM72Q6ZMU5 477 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 TAF8Q7Z7C8 310 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 RHOT1Q8IXI2 618 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 HCAR2Q8TDS4 363 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 ELMO1Q92556 727 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 SGF29Q96ES7 293 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 DCBLD2Q96PD2 775 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 TRIM4Q9C037 500 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 ATP13A1Q9HD20 1204 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 CCDC177Q9NQR7 707 aaPredicted RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 EIF3LQ9Y262 564 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 PPP2R2CQ9Y2T4 447 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 TRIM64BA6NI03 449 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 PPP2R1BP30154 601 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 OR1E1P30953 314 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 LRRC63Q05C16 580 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 CACHD1Q5VU97 1274 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 RPTNQ6XPR3 784 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 PRPF39Q86UA1 669 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 PLD3Q8IV08 490 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 ING5Q8WYH8 240 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 SMG7Q92540 1137 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 GPRASP2Q96D09 838 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 SHCBP1LQ9BZQ2 653 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 MANSC1Q9H8J5 431 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.91□□□□□ -1.33e-7■■□□□ 13.3
TTC3-215ENST00000476784 AHSPQ9NZD4 102 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 PLA2G6O60733 806 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 KERAO60938 352 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 GLUD1P00367 558 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 SCP2P22307 547 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 TLX1P31314 330 aaPredicted RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 ERFP50548 548 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 SUZ12Q15022 739 aaKnown RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 MAPRE2Q15555 327 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 C11orf57Q6ZUT1 292 aaPredicted RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 AGGF1Q8N302 714 aaeCLIP6.9□□□□□ -1.33e-6■□□□□ 11.1
TTC3-215ENST00000476784 EDEM1Q92611 657 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 TUFT1Q9NNX1 390 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 ZNF112Q9UJU3 913 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 NOVA2Q9UNW9 492 aaKnown RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 SNCAIPQ9Y6H5 919 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 KDM6AO15550 1401 aaPredicted RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 MYO1CO00159 1063 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 GYG2O15488 501 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 MYL2P10916 166 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 PTPN1P18031 435 aaKnown RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 CYP2A7P20853 494 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 PEX19P40855 299 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 CASRP41180 1078 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 MMRN1Q13201 1228 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 ACVR2BQ13705 512 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 PDK1Q15118 436 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 TRADDQ15628 312 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 GRIK4Q16099 956 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 P3H1Q32P28 736 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 ZNF484Q5JVG2 852 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 PPP1R15BQ5SWA1 713 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 RETSATQ6NUM9 610 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 LIX1Q8N485 282 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 ECSITQ9BQ95 431 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 CARD14Q9BXL6 1004 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 NT5C1B-RDH14C9J2C7 533 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 CCNT2O60583 730 aaKnown RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 TCN1P20061 433 aaPredicted RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 BCL2L1Q07817 233 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 GRSF1Q12849 480 aaKnown RBP eCLIP6.9□□□□□ -1.3
TTC3-215ENST00000476784 GSPT2Q8IYD1 628 aaKnown RBP6.9□□□□□ -1.3
TTC3-215ENST00000476784 SLC35F6Q8N357 371 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 CCDC185Q8N715 623 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 OR14C36Q8NHC7 312 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 AIFM3Q96NN9 605 aa6.9□□□□□ -1.3
TTC3-215ENST00000476784 PPP1R2P1Q96PQ5 205 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms