RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 DEC1Q9P2X7 70 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 SUSD2Q9UGT4 822 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 CYP8B1Q9UNU6 501 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 APOBEC2Q9Y235 224 aaKnown RBP12.11□□□□□ -0.47
BRCA1-213ENST00000476777 STARD13Q9Y3M8 1113 aa12.11□□□□□ -0.47
BRCA1-213ENST00000476777 GOLGA8IPA6NC78 632 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 GOLGA8JA6NMD2 632 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 LDHAP00338 332 aaKnown RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 GARTP22102 1010 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 WARSP23381 471 aaKnown RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 DDIT3P35638 169 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 CACNA2D1P54289 1103 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 GRIN1Q05586 938 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 MYO1EQ12965 1108 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 GRIK2Q13002 908 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 PREPLQ4J6C6 727 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 MDH1BQ5I0G3 518 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 TDRD10Q5VZ19 366 aaKnown RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 BTBD8Q5XKL5 378 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 EGFLAMQ63HQ2 1017 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 TMEM25Q86YD3 366 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 RGL4Q8IZJ4 473 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 IPO4Q8TEX9 1081 aaKnown RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 ERLEC1Q96DZ1 483 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 SLITRK1Q96PX8 696 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 ACCSQ96QU6 501 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 ACOX2Q99424 681 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 DUSP9Q99956 384 aaKnown RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 CBWD1Q9BRT8 395 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 ZDHHC5Q9C0B5 715 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 CD93Q9NPY3 652 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 KIAA1522Q9P206 1035 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-213ENST00000476777 DKK4Q9UBT3 224 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 PCOLCE2Q9UKZ9 415 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 EXOC7Q9UPT5 735 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
BRCA1-213ENST00000476777 SHROOM3Q8TF72 1996 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 ZBTB24O43167 697 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-213ENST00000476777 COCHO43405 550 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 TMEM191BP0C7N4 346 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 GNSP15586 552 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 MAOBP27338 520 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 NUMA1Q14980 2115 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 ANO4Q32M45 955 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 SYCP2LQ5T4T6 812 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 TMPRSS7Q7RTY8 843 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 BBS7Q8IWZ6 715 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 OR5B17Q8NGF7 314 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 RASSF8Q8NHQ8 419 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 FOXJ1Q92949 421 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 GABRG3Q99928 467 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 MRPL45Q9BRJ2 306 aaKnown RBP12.09□□□□□ -0.47
BRCA1-213ENST00000476777 SLC6A17Q9H1V8 727 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 SPHK2Q9NRA0 654 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 INTS13Q9NVM9 706 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 TBC1D7Q9P0N9 293 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
BRCA1-213ENST00000476777 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.47
BRCA1-213ENST00000476777 ATMQ13315 3056 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 EIF4E1BA6NMX2 242 aaKnown RBP12.08□□□□□ -0.48
BRCA1-213ENST00000476777 NDUFS2O75306 463 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 DKK1O94907 266 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 YWHAQP27348 245 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
BRCA1-213ENST00000476777 GNL1P36915 607 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-213ENST00000476777 CASP5P51878 434 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 IFRD2Q12894 506 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-213ENST00000476777 WDR45BQ5MNZ6 344 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 HS2ST1Q7LGA3 356 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 CHPFQ8IZ52 775 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 GLIS3Q8NEA6 775 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 BAHD1Q8TBE0 780 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-213ENST00000476777 ADAM32Q8TC27 787 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 DNASE2BQ8WZ79 361 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 OVCA2Q8WZ82 227 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 FBXO32Q969P5 355 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 WBP2Q969T9 261 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 ANKRD36BP1Q96IX9 119 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 MRGPRX1Q96LB2 322 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 MMS19Q96T76 1030 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 ZNF518BQ9C0D4 1074 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 PCIF1Q9H4Z3 704 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 TOR4AQ9NXH8 423 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 CACNA2D2Q9NY47 1150 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 SEL1LQ9UBV2 794 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 SH3BP1Q9Y3L3 701 aa12.08□□□□□ -0.48
BRCA1-213ENST00000476777 R3HCC1Q9Y3T6 440 aaKnown RBP12.08□□□□□ -0.48
BRCA1-213ENST00000476777 A0A1B0GTW7 788 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 PRRT4C9JH25 899 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 GCNT3O95395 438 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 GAP43P17677 238 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 PTPN1P18031 435 aaKnown RBP12.07□□□□□ -0.48
BRCA1-213ENST00000476777 TUBP50607 506 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 HECTD3Q5T447 861 aa12.07□□□□□ -0.48
BRCA1-213ENST00000476777 SNX30Q5VWJ9 437 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms