RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PCIF1Q9H4Z3 704 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 CD93Q9NPY3 652 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 SPHK2Q9NRA0 654 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 SUSD2Q9UGT4 822 aa17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 SMG1Q96Q15 3661 aaKnown RBP17.5■□□□□ 0.39
APOBEC3F-203ENST00000476513 EIF5BO60841 1220 aaKnown RBP17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 CBFA2T3O75081 653 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 GCNT3O95395 438 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 ZIC2O95409 532 aaPredicted RBP17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 YWHAQP27348 245 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 CASP5P51878 434 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 GRIK2Q13002 908 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 ANO4Q32M45 955 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 SYCP2LQ5T4T6 812 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 NUDT18Q6ZVK8 323 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 GLRX5Q86SX6 157 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 LRIG1Q96JA1 1093 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 MMS19Q96T76 1030 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 MRPL45Q9BRJ2 306 aaKnown RBP17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 ZNF518BQ9C0D4 1074 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 SLC6A17Q9H1V8 727 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 PCOLCE2Q9UKZ9 415 aa17.49■□□□□ 0.39
APOBEC3F-203ENST00000476513 SETXQ7Z333 2677 aaKnown RBP17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 NDUFS2O75306 463 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 TNNC2P02585 160 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 GNSP15586 552 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 GAP43P17677 238 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 MAOBP27338 520 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 GNL1P36915 607 aaPredicted RBP17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 CHPFQ8IZ52 775 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 SYCP3Q8IZU3 236 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 FOXJ1Q92949 421 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 WBP2Q969T9 261 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 DNAJC19Q96DA6 116 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 KIF2CQ99661 725 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 DUSP9Q99956 384 aaKnown RBP17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 ZDHHC5Q9C0B5 715 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 ELOVL4Q9GZR5 314 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 SNX25Q9H3E2 840 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 SCUBE2Q9NQ36 999 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 SH3BP1Q9Y3L3 701 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 PCDHB13Q9Y5F0 798 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 CEP192Q8TEP8 1941 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 PLXNB3Q9ULL4 1909 aa17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 FLNBO75369 2602 aaKnown RBP17.48■□□□□ 0.39
APOBEC3F-203ENST00000476513 H3BQV1 296 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 CLDN5O00501 218 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 PTPN1P18031 435 aaKnown RBP17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 DUOXA2Q1HG44 320 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 WDR45BQ5MNZ6 344 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 HECTD3Q5T447 861 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 GRAMD4Q6IC98 578 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 SDE2Q6IQ49 451 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 USP49Q70CQ1 688 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 NUP93Q8N1F7 819 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 GPD1LQ8N335 351 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 PDZD8Q8NEN9 1154 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 OVCA2Q8WZ82 227 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 FBXO32Q969P5 355 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 EPSTI1Q96J88 318 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 MRGPRX1Q96LB2 322 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 GABRG3Q99928 467 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 FGFBP2Q9BYJ0 223 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 DNAJC17Q9NVM6 304 aaKnown RBP17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 KIAA1522Q9P206 1035 aaPredicted RBP17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 CHORDC1Q9UHD1 332 aaPredicted RBP17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 RAD54BQ9Y620 910 aa17.47■□□□□ 0.39
APOBEC3F-203ENST00000476513 ASXL3Q9C0F0 2248 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 EIF4E1BA6NMX2 242 aaKnown RBP17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 TACC1O75410 805 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 RTN3O95197 1032 aaPredicted RBP17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 BMP15O95972 392 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 OR6B3Q8NGW1 331 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 SETD7Q8WTS6 366 aaKnown RBP17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 B3GNT5Q9BYG0 378 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 DPEP3Q9H4B8 488 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 CCSER2Q9H7U1 834 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 IL21RQ9HBE5 538 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 OLFML3Q9NRN5 406 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 DKK4Q9UBT3 224 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 STK17AQ9UEE5 414 aa17.46■□□□□ 0.39
APOBEC3F-203ENST00000476513 CELSR3Q9NYQ7 3312 aa17.46■□□□□ 0.38
APOBEC3F-203ENST00000476513 PRRT4C9JH25 899 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 IRF1P10914 325 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 ALCAMQ13740 583 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 SNX30Q5VWJ9 437 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 KIAA1324Q6UXG2 1013 aaKnown RBP17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 TMPRSS7Q7RTY8 843 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 CBWD2Q8IUF1 395 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 SCAMP5Q8TAC9 235 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 DNASE2BQ8WZ79 361 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 CACNA2D2Q9NY47 1150 aa17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 HELZ2Q9BYK8 2649 aaKnown RBP17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 URB1O60287 2271 aaKnown RBP17.45■□□□□ 0.38
APOBEC3F-203ENST00000476513 A0A1B0GTW7 788 aa17.44■□□□□ 0.38
APOBEC3F-203ENST00000476513 ZNF233A6NK53 670 aa17.44■□□□□ 0.38
APOBEC3F-203ENST00000476513 NEDD8-MDP1E9PL57 170 aa17.44■□□□□ 0.38
APOBEC3F-203ENST00000476513 CACNG3O60359 315 aa17.44■□□□□ 0.38
APOBEC3F-203ENST00000476513 PRPF6O94906 941 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms